Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
NKX2-1P43699 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
NKX2-1P43699 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.67□□□□□ -0.54
NKX2-1P43699 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
NKX2-1P43699 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC11.67□□□□□ -0.54
NKX2-1P43699 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC11.67□□□□□ -0.54
NKX2-1P43699 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
NKX2-1P43699 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC11.67□□□□□ -0.54
NKX2-1P43699 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
NKX2-1P43699 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
NKX2-1P43699 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
NKX2-1P43699 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
NKX2-1P43699 AC073869.1-201ENST00000415574 2762 ntBASIC11.67□□□□□ -0.54
NKX2-1P43699 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
NKX2-1P43699 PGGT1BP2-201ENST00000398621 1028 ntBASIC11.67□□□□□ -0.54
NKX2-1P43699 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC11.67□□□□□ -0.54
NKX2-1P43699 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC11.67□□□□□ -0.54
NKX2-1P43699 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC11.67□□□□□ -0.54
NKX2-1P43699 TSSK5P-201ENST00000423978 907 ntBASIC11.67□□□□□ -0.54
NKX2-1P43699 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC11.67□□□□□ -0.54
NKX2-1P43699 AL442647.2-201ENST00000429864 857 ntBASIC11.67□□□□□ -0.54
NKX2-1P43699 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
NKX2-1P43699 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 AC068587.3-201ENST00000526613 355 ntBASIC11.67□□□□□ -0.54
NKX2-1P43699 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 AC104794.3-201ENST00000566840 1248 ntBASIC11.67□□□□□ -0.54
NKX2-1P43699 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC11.67□□□□□ -0.54
NKX2-1P43699 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
NKX2-1P43699 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC11.67□□□□□ -0.54
NKX2-1P43699 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
NKX2-1P43699 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC11.67□□□□□ -0.54
NKX2-1P43699 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC11.67□□□□□ -0.54
NKX2-1P43699 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
NKX2-1P43699 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC11.67□□□□□ -0.54
NKX2-1P43699 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
NKX2-1P43699 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
NKX2-1P43699 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
NKX2-1P43699 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC11.67□□□□□ -0.54
NKX2-1P43699 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 AGGF1P10-201ENST00000635005 2191 ntBASIC11.67□□□□□ -0.54
NKX2-1P43699 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-1P43699 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.66□□□□□ -0.54
NKX2-1P43699 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC11.66□□□□□ -0.54
NKX2-1P43699 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
NKX2-1P43699 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC11.66□□□□□ -0.54
NKX2-1P43699 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.66□□□□□ -0.54
NKX2-1P43699 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC11.66□□□□□ -0.54
NKX2-1P43699 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.66□□□□□ -0.54
NKX2-1P43699 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC11.66□□□□□ -0.54
NKX2-1P43699 AC061965.1-201ENST00000560524 1465 ntBASIC11.66□□□□□ -0.54
NKX2-1P43699 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 PTPA-215ENST00000432124 567 ntTSL 4 BASIC11.66□□□□□ -0.54
NKX2-1P43699 INE1-201ENST00000456273 945 ntBASIC11.66□□□□□ -0.54
NKX2-1P43699 FTLP10-202ENST00000505798 471 ntBASIC11.66□□□□□ -0.54
NKX2-1P43699 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC11.66□□□□□ -0.54
NKX2-1P43699 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC11.66□□□□□ -0.54
NKX2-1P43699 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.66□□□□□ -0.54
NKX2-1P43699 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC11.66□□□□□ -0.54
NKX2-1P43699 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms