Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSR1P43307 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSR1P43307 AC023310.1-201ENST00000554836 735 ntBASIC15.22■□□□□ 0.03
SSR1P43307 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.22■□□□□ 0.03
SSR1P43307 AC005225.4-201ENST00000557330 545 ntBASIC15.22■□□□□ 0.03
SSR1P43307 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.22■□□□□ 0.03
SSR1P43307 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSR1P43307 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSR1P43307 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSR1P43307 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.22■□□□□ 0.03
SSR1P43307 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSR1P43307 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSR1P43307 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.22■□□□□ 0.03
SSR1P43307 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SSR1P43307 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.22■□□□□ 0.03
SSR1P43307 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.22■□□□□ 0.03
SSR1P43307 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.22■□□□□ 0.03
SSR1P43307 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSR1P43307 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSR1P43307 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSR1P43307 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSR1P43307 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSR1P43307 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSR1P43307 AP001972.5-201ENST00000624624 2338 ntBASIC15.21■□□□□ 0.03
SSR1P43307 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSR1P43307 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC15.21■□□□□ 0.03
SSR1P43307 AGAP10P-201ENST00000454844 2418 ntBASIC15.21■□□□□ 0.03
SSR1P43307 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSR1P43307 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
SSR1P43307 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSR1P43307 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSR1P43307 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSR1P43307 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.21■□□□□ 0.03
SSR1P43307 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSR1P43307 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSR1P43307 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.21■□□□□ 0.03
SSR1P43307 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSR1P43307 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.21■□□□□ 0.03
SSR1P43307 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSR1P43307 AC026954.1-201ENST00000429771 1293 ntBASIC15.21■□□□□ 0.03
SSR1P43307 CHMP1AP1-201ENST00000445563 662 ntBASIC15.21■□□□□ 0.03
SSR1P43307 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSR1P43307 C2orf69P2-201ENST00000562032 1123 ntBASIC15.21■□□□□ 0.03
SSR1P43307 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSR1P43307 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSR1P43307 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.21■□□□□ 0.03
SSR1P43307 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.21■□□□□ 0.03
SSR1P43307 AC012645.4-201ENST00000610691 1061 ntBASIC15.21■□□□□ 0.03
SSR1P43307 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.21■□□□□ 0.03
SSR1P43307 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SSR1P43307 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSR1P43307 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSR1P43307 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSR1P43307 USP47-202ENST00000339865 7775 ntTSL 2 BASIC15.21■□□□□ 0.03
SSR1P43307 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC15.21■□□□□ 0.03
SSR1P43307 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.21■□□□□ 0.02
SSR1P43307 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SSR1P43307 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SSR1P43307 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SSR1P43307 AMT-221ENST00000538581 2038 ntTSL 2 BASIC15.21■□□□□ 0.02
SSR1P43307 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
SSR1P43307 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SSR1P43307 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.2■□□□□ 0.02
SSR1P43307 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.2■□□□□ 0.02
SSR1P43307 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.2■□□□□ 0.02
SSR1P43307 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SSR1P43307 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR1P43307 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.2■□□□□ 0.02
SSR1P43307 FAM90A12P-201ENST00000519497 2375 ntBASIC15.2■□□□□ 0.02
SSR1P43307 FAM90A24P-201ENST00000520792 2369 ntBASIC15.2■□□□□ 0.02
SSR1P43307 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.2■□□□□ 0.02
SSR1P43307 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
SSR1P43307 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR1P43307 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SSR1P43307 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.2■□□□□ 0.02
SSR1P43307 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR1P43307 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR1P43307 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SSR1P43307 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.2■□□□□ 0.02
SSR1P43307 AC010141.1-201ENST00000411585 623 ntBASIC15.2■□□□□ 0.02
SSR1P43307 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.2■□□□□ 0.02
SSR1P43307 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
SSR1P43307 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.2■□□□□ 0.02
SSR1P43307 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.2■□□□□ 0.02
SSR1P43307 AP000812.2-201ENST00000538934 718 ntBASIC15.2■□□□□ 0.02
SSR1P43307 KRT17P8-201ENST00000540749 863 ntBASIC15.2■□□□□ 0.02
SSR1P43307 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SSR1P43307 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.2■□□□□ 0.02
SSR1P43307 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.2■□□□□ 0.02
SSR1P43307 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.2■□□□□ 0.02
SSR1P43307 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR1P43307 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SSR1P43307 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.2■□□□□ 0.02
SSR1P43307 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SSR1P43307 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SSR1P43307 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.2■□□□□ 0.02
SSR1P43307 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR1P43307 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC15.2■□□□□ 0.02
SSR1P43307 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SSR1P43307 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms