Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RFC5P40937 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
RFC5P40937 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 RCC2P1-201ENST00000452257 1476 ntBASIC15.61■□□□□ 0.09
RFC5P40937 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.61■□□□□ 0.09
RFC5P40937 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.61■□□□□ 0.09
RFC5P40937 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.61■□□□□ 0.09
RFC5P40937 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
RFC5P40937 PYY2-201ENST00000315776 282 ntBASIC15.61■□□□□ 0.09
RFC5P40937 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.61■□□□□ 0.09
RFC5P40937 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.61■□□□□ 0.09
RFC5P40937 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.61■□□□□ 0.09
RFC5P40937 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 OR5BD1P-201ENST00000532527 817 ntBASIC15.61■□□□□ 0.09
RFC5P40937 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC15.61■□□□□ 0.09
RFC5P40937 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.61■□□□□ 0.09
RFC5P40937 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.61■□□□□ 0.09
RFC5P40937 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.61■□□□□ 0.09
RFC5P40937 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
RFC5P40937 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.61■□□□□ 0.09
RFC5P40937 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.61■□□□□ 0.09
RFC5P40937 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RFC5P40937 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RFC5P40937 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.6■□□□□ 0.09
RFC5P40937 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
RFC5P40937 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.6■□□□□ 0.09
RFC5P40937 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RFC5P40937 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
RFC5P40937 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
RFC5P40937 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.6■□□□□ 0.09
RFC5P40937 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RFC5P40937 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
RFC5P40937 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.6■□□□□ 0.09
RFC5P40937 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.6■□□□□ 0.09
RFC5P40937 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.6■□□□□ 0.09
RFC5P40937 RPS2P36-201ENST00000456516 831 ntBASIC15.6■□□□□ 0.09
RFC5P40937 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC15.6■□□□□ 0.09
RFC5P40937 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.6■□□□□ 0.09
RFC5P40937 AC095040.1-201ENST00000513286 675 ntBASIC15.6■□□□□ 0.09
RFC5P40937 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.6■□□□□ 0.09
RFC5P40937 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
RFC5P40937 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC15.6■□□□□ 0.09
RFC5P40937 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 MIR3147-201ENST00000577811 66 ntBASIC15.6■□□□□ 0.09
RFC5P40937 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.6■□□□□ 0.09
RFC5P40937 AC018635.2-201ENST00000608625 364 ntBASIC15.6■□□□□ 0.09
RFC5P40937 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
RFC5P40937 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.6■□□□□ 0.09
RFC5P40937 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.6■□□□□ 0.09
RFC5P40937 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RFC5P40937 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RFC5P40937 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.6■□□□□ 0.09
RFC5P40937 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFC5P40937 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RFC5P40937 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RFC5P40937 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RFC5P40937 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RFC5P40937 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.59■□□□□ 0.09
RFC5P40937 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RFC5P40937 AC027601.5-201ENST00000624065 2482 ntBASIC15.59■□□□□ 0.09
RFC5P40937 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RFC5P40937 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms