Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.85□□□□□ -0.35
FREM3P0C091 AC015909.5-201ENST00000624336 2266 ntBASIC12.85□□□□□ -0.35
FREM3P0C091 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.85□□□□□ -0.35
FREM3P0C091 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
FREM3P0C091 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
FREM3P0C091 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.85□□□□□ -0.35
FREM3P0C091 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
FREM3P0C091 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
FREM3P0C091 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
FREM3P0C091 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.85□□□□□ -0.35
FREM3P0C091 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
FREM3P0C091 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
FREM3P0C091 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC12.85□□□□□ -0.35
FREM3P0C091 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.85□□□□□ -0.35
FREM3P0C091 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.85□□□□□ -0.35
FREM3P0C091 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.85□□□□□ -0.35
FREM3P0C091 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
FREM3P0C091 MIR2392-201ENST00000584881 84 ntBASIC12.85□□□□□ -0.35
FREM3P0C091 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.85□□□□□ -0.35
FREM3P0C091 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
FREM3P0C091 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.85□□□□□ -0.35
FREM3P0C091 AC007881.3-201ENST00000608897 607 ntBASIC12.85□□□□□ -0.35
FREM3P0C091 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 AL157996.1-201ENST00000624684 2299 ntBASIC12.85□□□□□ -0.35
FREM3P0C091 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 PTENP1-202ENST00000532280 3996 ntBASIC12.84□□□□□ -0.35
FREM3P0C091 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
FREM3P0C091 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.84□□□□□ -0.35
FREM3P0C091 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.84□□□□□ -0.35
FREM3P0C091 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 AC023794.5-201ENST00000564380 2157 ntBASIC12.84□□□□□ -0.35
FREM3P0C091 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.84□□□□□ -0.35
FREM3P0C091 AC073869.1-201ENST00000415574 2762 ntBASIC12.84□□□□□ -0.35
FREM3P0C091 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 AC074138.1-201ENST00000611182 1303 ntBASIC12.84□□□□□ -0.35
FREM3P0C091 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.84□□□□□ -0.35
FREM3P0C091 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.84□□□□□ -0.35
FREM3P0C091 CTBP2P4-201ENST00000513884 920 ntBASIC12.84□□□□□ -0.35
FREM3P0C091 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
FREM3P0C091 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.84□□□□□ -0.35
FREM3P0C091 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
FREM3P0C091 LINC01783-202ENST00000614408 828 ntBASIC12.84□□□□□ -0.35
FREM3P0C091 BX284668.2-205ENST00000619677 828 ntBASIC12.84□□□□□ -0.35
FREM3P0C091 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
FREM3P0C091 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.84□□□□□ -0.35
FREM3P0C091 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
FREM3P0C091 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.84□□□□□ -0.35
FREM3P0C091 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.84□□□□□ -0.35
FREM3P0C091 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
FREM3P0C091 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
FREM3P0C091 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
FREM3P0C091 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
FREM3P0C091 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
FREM3P0C091 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
FREM3P0C091 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
FREM3P0C091 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.83□□□□□ -0.35
FREM3P0C091 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
FREM3P0C091 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
FREM3P0C091 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.35
FREM3P0C091 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
FREM3P0C091 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
FREM3P0C091 LINC00265-2P-201ENST00000413372 782 ntBASIC12.83□□□□□ -0.35
FREM3P0C091 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
FREM3P0C091 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.83□□□□□ -0.35
FREM3P0C091 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.83□□□□□ -0.35
FREM3P0C091 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
FREM3P0C091 MIR4722-201ENST00000578292 60 ntBASIC12.83□□□□□ -0.35
FREM3P0C091 MIR3180-2-201ENST00000581748 88 ntBASIC12.83□□□□□ -0.35
FREM3P0C091 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC12.83□□□□□ -0.35
FREM3P0C091 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.83□□□□□ -0.35
FREM3P0C091 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.83□□□□□ -0.36
FREM3P0C091 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms