Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC11.3□□□□□ -0.6
APOC3P02656 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
APOC3P02656 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 AC106795.1-205ENST00000512851 1056 ntBASIC11.3□□□□□ -0.6
APOC3P02656 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC11.3□□□□□ -0.6
APOC3P02656 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC11.3□□□□□ -0.6
APOC3P02656 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC11.3□□□□□ -0.6
APOC3P02656 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.3□□□□□ -0.6
APOC3P02656 AC026979.3-201ENST00000607315 403 ntBASIC11.3□□□□□ -0.6
APOC3P02656 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.3□□□□□ -0.6
APOC3P02656 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
APOC3P02656 TRO-201ENST00000173898 4647 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC11.3□□□□□ -0.6
APOC3P02656 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 CENPP-201ENST00000375576 3088 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.3□□□□□ -0.6
APOC3P02656 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
APOC3P02656 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
APOC3P02656 ENDOU-201ENST00000229003 2332 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.3□□□□□ -0.6
APOC3P02656 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.3□□□□□ -0.6
APOC3P02656 SETD7-201ENST00000274031 7365 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 FOXD2-AS1-201ENST00000445551 2509 ntBASIC11.3□□□□□ -0.6
APOC3P02656 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 CCNA1-201ENST00000255465 1879 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC11.29□□□□□ -0.6
APOC3P02656 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 AL358781.1-202ENST00000321081 1360 ntBASIC11.29□□□□□ -0.6
APOC3P02656 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC11.29□□□□□ -0.6
APOC3P02656 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
APOC3P02656 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC11.29□□□□□ -0.6
APOC3P02656 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC11.29□□□□□ -0.6
APOC3P02656 LINC02228-202ENST00000641261 2489 ntBASIC11.29□□□□□ -0.6
APOC3P02656 PJA1-204ENST00000374584 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 SCN4B-201ENST00000324727 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC11.29□□□□□ -0.6
APOC3P02656 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC11.29□□□□□ -0.6
APOC3P02656 LIN28AP1-201ENST00000429574 405 ntBASIC11.29□□□□□ -0.6
APOC3P02656 ATP5G1P1-201ENST00000448724 379 ntBASIC11.29□□□□□ -0.6
APOC3P02656 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.29□□□□□ -0.6
APOC3P02656 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
APOC3P02656 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.29□□□□□ -0.6
APOC3P02656 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
APOC3P02656 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
APOC3P02656 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
APOC3P02656 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.29□□□□□ -0.6
APOC3P02656 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC11.29□□□□□ -0.6
APOC3P02656 MIR4497-201ENST00000583208 89 ntBASIC11.29□□□□□ -0.6
APOC3P02656 RPS15-202ENST00000585665 467 ntTSL 3 BASIC11.29□□□□□ -0.6
APOC3P02656 MTDHP4-201ENST00000600287 670 ntBASIC11.29□□□□□ -0.6
APOC3P02656 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.29□□□□□ -0.6
APOC3P02656 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.29□□□□□ -0.6
APOC3P02656 EIF4E3-205ENST00000448225 6209 ntTSL 5 BASIC11.29□□□□□ -0.6
APOC3P02656 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC11.29□□□□□ -0.6
APOC3P02656 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 SLC45A4-201ENST00000024061 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 MFAP4-201ENST00000299610 1873 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 EPHB6-201ENST00000411471 3367 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 MFAP4-203ENST00000497081 1876 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 TUSC5-201ENST00000333813 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC11.29□□□□□ -0.6
APOC3P02656 KCND3-203ENST00000369697 7396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 MRPL37P1-201ENST00000592451 1337 ntBASIC11.29□□□□□ -0.6
APOC3P02656 PRKAG2-202ENST00000392801 2281 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 CAMK4-201ENST00000282356 12240 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC11.29□□□□□ -0.6
APOC3P02656 OTUD6B-206ENST00000617869 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC11.29□□□□□ -0.6
APOC3P02656 AL021392.1-201ENST00000426112 2949 ntTSL 2 BASIC11.29□□□□□ -0.6
APOC3P02656 DYNC1I1-205ENST00000447467 2947 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 FOXO4-202ENST00000374259 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC3P02656 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC11.28□□□□□ -0.6
APOC3P02656 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.28□□□□□ -0.6
APOC3P02656 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC11.28□□□□□ -0.6
APOC3P02656 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 ZNF542P-207ENST00000495307 3393 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms