Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GPC4O75487 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.31□□□□□ -0.12
GPC4O75487 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
GPC4O75487 AC005586.2-201ENST00000563946 837 ntBASIC14.31□□□□□ -0.12
GPC4O75487 AC005730.2-201ENST00000564549 1184 ntBASIC14.31□□□□□ -0.12
GPC4O75487 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.31□□□□□ -0.12
GPC4O75487 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GPC4O75487 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
GPC4O75487 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.31□□□□□ -0.12
GPC4O75487 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC4O75487 AC009884.2-201ENST00000603110 324 ntBASIC14.31□□□□□ -0.12
GPC4O75487 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GPC4O75487 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC4O75487 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.31□□□□□ -0.12
GPC4O75487 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.31□□□□□ -0.12
GPC4O75487 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC4O75487 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC4O75487 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC4O75487 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.31□□□□□ -0.12
GPC4O75487 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GPC4O75487 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.31□□□□□ -0.12
GPC4O75487 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
GPC4O75487 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC4O75487 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
GPC4O75487 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.31□□□□□ -0.12
GPC4O75487 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC14.31□□□□□ -0.12
GPC4O75487 FAM90A12P-201ENST00000519497 2375 ntBASIC14.31□□□□□ -0.12
GPC4O75487 FAM90A24P-201ENST00000520792 2369 ntBASIC14.31□□□□□ -0.12
GPC4O75487 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
GPC4O75487 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
GPC4O75487 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
GPC4O75487 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.31□□□□□ -0.12
GPC4O75487 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
GPC4O75487 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
GPC4O75487 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
GPC4O75487 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
GPC4O75487 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
GPC4O75487 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.3□□□□□ -0.12
GPC4O75487 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 AC073548.1-201ENST00000624088 1882 ntBASIC14.3□□□□□ -0.12
GPC4O75487 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.3□□□□□ -0.12
GPC4O75487 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.3□□□□□ -0.12
GPC4O75487 POM121L10P-201ENST00000436994 1285 ntBASIC14.3□□□□□ -0.12
GPC4O75487 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 TUBB8P8-201ENST00000458717 1058 ntBASIC14.3□□□□□ -0.12
GPC4O75487 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.3□□□□□ -0.12
GPC4O75487 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.3□□□□□ -0.12
GPC4O75487 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.3□□□□□ -0.12
GPC4O75487 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.3□□□□□ -0.12
GPC4O75487 AC104506.1-201ENST00000609247 429 ntBASIC14.3□□□□□ -0.12
GPC4O75487 AC005695.3-201ENST00000614522 232 ntBASIC14.3□□□□□ -0.12
GPC4O75487 AL023803.2-201ENST00000620080 638 ntBASIC14.3□□□□□ -0.12
GPC4O75487 AC005562.1-201ENST00000583030 3219 ntBASIC14.3□□□□□ -0.12
GPC4O75487 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
GPC4O75487 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
GPC4O75487 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC14.3□□□□□ -0.12
GPC4O75487 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 KRT8P29-201ENST00000420409 1371 ntBASIC14.3□□□□□ -0.12
GPC4O75487 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
GPC4O75487 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC14.3□□□□□ -0.12
GPC4O75487 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GPC4O75487 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.3□□□□□ -0.12
GPC4O75487 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.3□□□□□ -0.12
GPC4O75487 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC14.3□□□□□ -0.12
GPC4O75487 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
GPC4O75487 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.29□□□□□ -0.12
GPC4O75487 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.29□□□□□ -0.12
GPC4O75487 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC14.29□□□□□ -0.12
GPC4O75487 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
GPC4O75487 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
GPC4O75487 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.29□□□□□ -0.12
GPC4O75487 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms