Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.64□□□□□ -0.23
GSC2O15499 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GSC2O15499 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 AC009093.2-202ENST00000620513 2079 ntBASIC13.63□□□□□ -0.23
GSC2O15499 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.63□□□□□ -0.23
GSC2O15499 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
GSC2O15499 USB1-207ENST00000563149 1751 ntTSL 2 BASIC13.63□□□□□ -0.23
GSC2O15499 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC13.63□□□□□ -0.23
GSC2O15499 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.63□□□□□ -0.23
GSC2O15499 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
GSC2O15499 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
GSC2O15499 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
GSC2O15499 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.63□□□□□ -0.23
GSC2O15499 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.63□□□□□ -0.23
GSC2O15499 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.63□□□□□ -0.23
GSC2O15499 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
GSC2O15499 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 BX842568.4-201ENST00000421222 227 ntBASIC13.63□□□□□ -0.23
GSC2O15499 AC134915.1-201ENST00000426461 574 ntBASIC13.63□□□□□ -0.23
GSC2O15499 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.63□□□□□ -0.23
GSC2O15499 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.63□□□□□ -0.23
GSC2O15499 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.63□□□□□ -0.23
GSC2O15499 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.63□□□□□ -0.23
GSC2O15499 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.63□□□□□ -0.23
GSC2O15499 AC112482.1-201ENST00000492080 688 ntBASIC13.63□□□□□ -0.23
GSC2O15499 AC027369.6-201ENST00000525520 931 ntBASIC13.63□□□□□ -0.23
GSC2O15499 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.63□□□□□ -0.23
GSC2O15499 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.63□□□□□ -0.23
GSC2O15499 AC010327.4-202ENST00000591484 748 ntBASIC13.63□□□□□ -0.23
GSC2O15499 AC138466.3-201ENST00000619983 221 ntBASIC13.63□□□□□ -0.23
GSC2O15499 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.63□□□□□ -0.23
GSC2O15499 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC13.63□□□□□ -0.23
GSC2O15499 AC026992.2-203ENST00000563004 2419 ntBASIC13.63□□□□□ -0.23
GSC2O15499 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.63□□□□□ -0.23
GSC2O15499 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC13.63□□□□□ -0.23
GSC2O15499 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13.63□□□□□ -0.23
GSC2O15499 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC13.63□□□□□ -0.23
GSC2O15499 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.63□□□□□ -0.23
GSC2O15499 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GSC2O15499 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.62□□□□□ -0.23
GSC2O15499 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
GSC2O15499 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC13.62□□□□□ -0.23
GSC2O15499 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GSC2O15499 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
GSC2O15499 BTBD7P1-201ENST00000447253 1453 ntBASIC13.62□□□□□ -0.23
GSC2O15499 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC13.62□□□□□ -0.23
GSC2O15499 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
GSC2O15499 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GSC2O15499 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
GSC2O15499 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.62□□□□□ -0.23
GSC2O15499 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GSC2O15499 AL359510.2-201ENST00000624958 2249 ntBASIC13.62□□□□□ -0.23
GSC2O15499 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
GSC2O15499 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.62□□□□□ -0.23
GSC2O15499 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
GSC2O15499 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GSC2O15499 HMGA1P1-201ENST00000415560 1062 ntBASIC13.62□□□□□ -0.23
GSC2O15499 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.62□□□□□ -0.23
GSC2O15499 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GSC2O15499 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC13.62□□□□□ -0.23
GSC2O15499 SPDYE18-201ENST00000510091 1050 ntBASIC13.62□□□□□ -0.23
GSC2O15499 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.62□□□□□ -0.23
GSC2O15499 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.62□□□□□ -0.23
GSC2O15499 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.62□□□□□ -0.23
GSC2O15499 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.62□□□□□ -0.23
GSC2O15499 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.62□□□□□ -0.23
GSC2O15499 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.62□□□□□ -0.23
GSC2O15499 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.62□□□□□ -0.23
GSC2O15499 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GSC2O15499 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
GSC2O15499 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GSC2O15499 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
GSC2O15499 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GSC2O15499 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms