Protein–RNA interactions for Protein: A6NKF2

ARID3C, AT-rich interactive domain-containing protein 3C, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3CA6NKF2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 HMGA1P1-201ENST00000415560 1062 ntBASIC21.78■■□□□ 1.08
ARID3CA6NKF2 RN7SL602P-201ENST00000578326 324 ntBASIC21.78■■□□□ 1.08
ARID3CA6NKF2 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 RN7SL718P-201ENST00000581254 303 ntBASIC21.78■■□□□ 1.08
ARID3CA6NKF2 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 MIR1307-201ENST00000408840 149 ntBASIC21.77■■□□□ 1.08
ARID3CA6NKF2 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 FDPSP7-201ENST00000429043 1054 ntBASIC21.77■■□□□ 1.08
ARID3CA6NKF2 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 CDK4P1-201ENST00000454213 828 ntBASIC21.77■■□□□ 1.08
ARID3CA6NKF2 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 AC113385.2-201ENST00000614465 762 ntBASIC21.77■■□□□ 1.08
ARID3CA6NKF2 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC21.77■■□□□ 1.08
ARID3CA6NKF2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
ARID3CA6NKF2 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 WARS-203ENST00000358655 2466 ntTSL 2 BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 RNA5SP491-201ENST00000362936 118 ntBASIC21.76■■□□□ 1.07
ARID3CA6NKF2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 KRT19P4-201ENST00000443208 943 ntBASIC21.76■■□□□ 1.07
ARID3CA6NKF2 VDAC1P11-201ENST00000458323 852 ntBASIC21.76■■□□□ 1.07
ARID3CA6NKF2 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 HPD-204ENST00000543163 1709 ntTSL 5 BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 AC020931.1-201ENST00000589622 1346 ntBASIC21.76■■□□□ 1.07
ARID3CA6NKF2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3CA6NKF2 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC21.75■■□□□ 1.07
ARID3CA6NKF2 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARID3CA6NKF2 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ARID3CA6NKF2 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ARID3CA6NKF2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC21.75■■□□□ 1.07
ARID3CA6NKF2 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC21.75■■□□□ 1.07
ARID3CA6NKF2 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
ARID3CA6NKF2 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ARID3CA6NKF2 AC005722.1-201ENST00000431878 964 ntBASIC21.75■■□□□ 1.07
ARID3CA6NKF2 RPSAP12-201ENST00000435879 888 ntBASIC21.75■■□□□ 1.07
ARID3CA6NKF2 AC147876.1-201ENST00000504408 322 ntBASIC21.75■■□□□ 1.07
ARID3CA6NKF2 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms