Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 AGGF1P1-201ENST00000509500 2073 ntBASIC14.2□□□□□ -0.14
SPASTQ9UBP0 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 AP000356.3-201ENST00000382243 753 ntBASIC14.2□□□□□ -0.14
SPASTQ9UBP0 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 DUTP3-201ENST00000450025 415 ntBASIC14.2□□□□□ -0.14
SPASTQ9UBP0 RN7SL181P-201ENST00000462921 277 ntBASIC14.2□□□□□ -0.14
SPASTQ9UBP0 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 IQSEC3P1-201ENST00000538799 536 ntBASIC14.2□□□□□ -0.14
SPASTQ9UBP0 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 AL031713.1-201ENST00000564813 661 ntBASIC14.2□□□□□ -0.14
SPASTQ9UBP0 AC073352.2-201ENST00000609385 439 ntBASIC14.2□□□□□ -0.14
SPASTQ9UBP0 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 MIR6727-201ENST00000620702 65 ntBASIC14.2□□□□□ -0.14
SPASTQ9UBP0 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 AL928921.2-201ENST00000641325 2442 ntBASIC14.2□□□□□ -0.14
SPASTQ9UBP0 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 IGF1-203ENST00000392904 761 ntTSL 5 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 AC253536.4-201ENST00000440539 267 ntBASIC14.19□□□□□ -0.14
SPASTQ9UBP0 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 MIR5572-201ENST00000583188 137 ntBASIC14.19□□□□□ -0.14
SPASTQ9UBP0 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 U62317.3-201ENST00000608319 855 ntBASIC14.19□□□□□ -0.14
SPASTQ9UBP0 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPASTQ9UBP0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms