Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN4Q9NQP4 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 AL157996.1-201ENST00000624684 2299 ntBASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 AL512384.1-201ENST00000406683 331 ntBASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 AP005018.1-201ENST00000525475 301 ntBASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 AL596325.1-201ENST00000563991 1082 ntBASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.1□□□□□ -0.15
PFDN4Q9NQP4 AC011481.3-201ENST00000623895 5594 ntBASIC14.09□□□□□ -0.15
PFDN4Q9NQP4 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PFDN4Q9NQP4 KRT8P28-201ENST00000433288 1390 ntBASIC14.09□□□□□ -0.15
PFDN4Q9NQP4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
PFDN4Q9NQP4 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.09□□□□□ -0.15
PFDN4Q9NQP4 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN4Q9NQP4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN4Q9NQP4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.09□□□□□ -0.15
PFDN4Q9NQP4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.09□□□□□ -0.15
PFDN4Q9NQP4 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN4Q9NQP4 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN4Q9NQP4 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms