Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
HDHD3Q9BSH5 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
HDHD3Q9BSH5 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
HDHD3Q9BSH5 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.02□□□□□ -0.48
HDHD3Q9BSH5 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
HDHD3Q9BSH5 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.02□□□□□ -0.48
HDHD3Q9BSH5 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
HDHD3Q9BSH5 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HDHD3Q9BSH5 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.02□□□□□ -0.48
HDHD3Q9BSH5 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 CNN2P8-201ENST00000421872 913 ntBASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 AC112492.5-201ENST00000421897 457 ntBASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 AL157407.1-201ENST00000435784 904 ntBASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 ST13P19-201ENST00000442505 1124 ntBASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 AC132192.2-201ENST00000596206 1147 ntBASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 AC233724.13-201ENST00000598383 410 ntBASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 AL022328.1-201ENST00000610050 478 ntBASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HDHD3Q9BSH5 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 ABCD1P2-201ENST00000429313 1601 ntBASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 AC102953.2-201ENST00000609755 3026 ntBASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 AL355102.3-201ENST00000554299 1678 ntBASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 AL355994.2-201ENST00000447882 704 ntBASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 AC007551.1-201ENST00000457394 519 ntBASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 RBM8B-201ENST00000555532 525 ntBASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms