Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GFI1Q99684 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
GFI1Q99684 AC244394.1-201ENST00000435000 1665 ntBASIC12.22□□□□□ -0.45
GFI1Q99684 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GFI1Q99684 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
GFI1Q99684 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
GFI1Q99684 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.22□□□□□ -0.45
GFI1Q99684 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
GFI1Q99684 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
GFI1Q99684 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GFI1Q99684 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GFI1Q99684 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GFI1Q99684 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
GFI1Q99684 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GFI1Q99684 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
GFI1Q99684 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GFI1Q99684 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GFI1Q99684 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GFI1Q99684 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
GFI1Q99684 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GFI1Q99684 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GFI1Q99684 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GFI1Q99684 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
GFI1Q99684 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GFI1Q99684 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.21□□□□□ -0.45
GFI1Q99684 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.21□□□□□ -0.45
GFI1Q99684 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
GFI1Q99684 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GFI1Q99684 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GFI1Q99684 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
GFI1Q99684 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
GFI1Q99684 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
GFI1Q99684 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.21□□□□□ -0.45
GFI1Q99684 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.21□□□□□ -0.45
GFI1Q99684 KLF2P1-201ENST00000447438 1042 ntBASIC12.21□□□□□ -0.45
GFI1Q99684 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GFI1Q99684 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GFI1Q99684 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.21□□□□□ -0.45
GFI1Q99684 AC078819.1-201ENST00000547454 765 ntBASIC12.21□□□□□ -0.45
GFI1Q99684 AC012085.1-201ENST00000548270 765 ntBASIC12.21□□□□□ -0.45
GFI1Q99684 AC003686.1-201ENST00000550956 1034 ntBASIC12.21□□□□□ -0.45
GFI1Q99684 AC006453.4-201ENST00000636949 1252 ntBASIC12.21□□□□□ -0.45
GFI1Q99684 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
GFI1Q99684 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GFI1Q99684 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
GFI1Q99684 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
GFI1Q99684 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
GFI1Q99684 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
GFI1Q99684 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
GFI1Q99684 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
GFI1Q99684 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
GFI1Q99684 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
GFI1Q99684 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
GFI1Q99684 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
GFI1Q99684 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
GFI1Q99684 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC12.2□□□□□ -0.46
GFI1Q99684 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.2□□□□□ -0.46
GFI1Q99684 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.2□□□□□ -0.46
GFI1Q99684 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
GFI1Q99684 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.2□□□□□ -0.46
GFI1Q99684 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 AC093462.1-201ENST00000621167 1683 ntBASIC12.2□□□□□ -0.46
GFI1Q99684 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 HSPA8P9-201ENST00000485881 1943 ntBASIC12.2□□□□□ -0.46
GFI1Q99684 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.2□□□□□ -0.46
GFI1Q99684 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
GFI1Q99684 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
GFI1Q99684 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
GFI1Q99684 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 DGCR5-201ENST00000399539 862 ntBASIC12.2□□□□□ -0.46
GFI1Q99684 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.2□□□□□ -0.46
GFI1Q99684 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.2□□□□□ -0.46
GFI1Q99684 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.2□□□□□ -0.46
GFI1Q99684 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.2□□□□□ -0.46
GFI1Q99684 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.2□□□□□ -0.46
GFI1Q99684 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GFI1Q99684 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.2□□□□□ -0.46
GFI1Q99684 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.2□□□□□ -0.46
GFI1Q99684 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
GFI1Q99684 C2orf69P2-201ENST00000562032 1123 ntBASIC12.2□□□□□ -0.46
GFI1Q99684 DUX4L46-201ENST00000566845 751 ntBASIC12.2□□□□□ -0.46
GFI1Q99684 AC140912.1-201ENST00000577171 1054 ntBASIC12.2□□□□□ -0.46
GFI1Q99684 ZACNP1-201ENST00000612259 710 ntBASIC12.2□□□□□ -0.46
GFI1Q99684 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms