Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATL1Q8WXF7 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATL1Q8WXF7 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATL1Q8WXF7 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATL1Q8WXF7 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATL1Q8WXF7 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ATL1Q8WXF7 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
ATL1Q8WXF7 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATL1Q8WXF7 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.93□□□□□ -0.18
ATL1Q8WXF7 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.93□□□□□ -0.18
ATL1Q8WXF7 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ATL1Q8WXF7 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ATL1Q8WXF7 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATL1Q8WXF7 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATL1Q8WXF7 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATL1Q8WXF7 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.93□□□□□ -0.18
ATL1Q8WXF7 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 SHMT1P1-201ENST00000419974 1312 ntBASIC13.92□□□□□ -0.18
ATL1Q8WXF7 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 AP002353.1-201ENST00000528257 1599 ntBASIC13.92□□□□□ -0.18
ATL1Q8WXF7 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 AC104073.2-201ENST00000453737 312 ntBASIC13.92□□□□□ -0.18
ATL1Q8WXF7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 MIR6752-201ENST00000618442 71 ntBASIC13.92□□□□□ -0.18
ATL1Q8WXF7 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATL1Q8WXF7 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 AC009779.1-201ENST00000551138 283 ntBASIC13.91□□□□□ -0.18
ATL1Q8WXF7 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 AL008638.5-201ENST00000623814 1298 ntBASIC13.91□□□□□ -0.18
ATL1Q8WXF7 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.91□□□□□ -0.18
ATL1Q8WXF7 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ATL1Q8WXF7 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms