Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 KRT8P19-201ENST00000551916 1455 ntBASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 MAGEA5-201ENST00000446757 942 ntBASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 RN7SL258P-201ENST00000478664 300 ntBASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 AC079328.1-201ENST00000560358 952 ntBASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 AL022334.2-201ENST00000610000 484 ntBASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 AC015967.2-201ENST00000624092 234 ntBASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 AC006435.4-201ENST00000625037 234 ntBASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 AL356737.1-201ENST00000634391 234 ntBASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 AC006453.1-201ENST00000636037 1257 ntBASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 RN7SL832P-201ENST00000607781 1756 ntBASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 RPL8P2-201ENST00000430538 502 ntBASIC14□□□□□ -0.17
TRIM48Q8IWZ4 AC092580.1-201ENST00000433998 658 ntBASIC14□□□□□ -0.17
TRIM48Q8IWZ4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 RNA5SP423-201ENST00000517127 109 ntBASIC14□□□□□ -0.17
TRIM48Q8IWZ4 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 AF254983.2-201ENST00000612331 135 ntBASIC14□□□□□ -0.17
TRIM48Q8IWZ4 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms