Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 KRT18P36-201ENST00000411618 1276 ntBASIC15.1■□□□□ 0.01
RNF135Q8IUD6 BRI3P1-201ENST00000440440 378 ntBASIC15.1■□□□□ 0.01
RNF135Q8IUD6 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 HNRNPA1P23-201ENST00000491091 1133 ntBASIC15.1■□□□□ 0.01
RNF135Q8IUD6 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 AC007952.4-201ENST00000573866 637 ntBASIC15.1■□□□□ 0.01
RNF135Q8IUD6 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 AC002044.2-201ENST00000624910 970 ntBASIC15.1■□□□□ 0.01
RNF135Q8IUD6 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 AL136172.1-201ENST00000598590 1394 ntBASIC15.1■□□□□ 0.01
RNF135Q8IUD6 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 AC140113.1-201ENST00000603467 169 ntBASIC15.09■□□□□ 0.01
RNF135Q8IUD6 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF135Q8IUD6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
RNF135Q8IUD6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.08■□□□□ 0.01
RNF135Q8IUD6 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.08■□□□□ 0.01
RNF135Q8IUD6 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
RNF135Q8IUD6 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0.01
RNF135Q8IUD6 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RNF135Q8IUD6 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.08■□□□□ 0
RNF135Q8IUD6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.08■□□□□ 0
RNF135Q8IUD6 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC15.08■□□□□ 0
RNF135Q8IUD6 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC15.08■□□□□ 0
RNF135Q8IUD6 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.08■□□□□ 0
RNF135Q8IUD6 AL512306.1-201ENST00000432698 848 ntBASIC15.08■□□□□ 0
RNF135Q8IUD6 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
RNF135Q8IUD6 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC15.08■□□□□ 0
RNF135Q8IUD6 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.08■□□□□ 0
RNF135Q8IUD6 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC15.08■□□□□ 0
RNF135Q8IUD6 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms