Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 PLEKHA6-202ENST00000414478 5091 ntTSL 5 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 SEMA6D-201ENST00000316364 6099 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 BX842568.4-201ENST00000421222 227 ntBASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 KRT18P32-201ENST00000424695 1287 ntBASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 AC142381.1-201ENST00000426099 345 ntBASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 AC079140.1-201ENST00000508039 487 ntBASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 AP000842.3-202ENST00000569238 1080 ntBASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 AL928654.5-201ENST00000624831 2501 ntBASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 MRPL37P1-201ENST00000592451 1337 ntBASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 ELL2P1-201ENST00000413990 1906 ntBASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 AP003969.2-201ENST00000623739 2275 ntBASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 SORD2P-201ENST00000558556 1069 ntBASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms