Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.25□□□□□ -0.29
EFNA3P52797 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC13.25□□□□□ -0.29
EFNA3P52797 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.25□□□□□ -0.29
EFNA3P52797 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
EFNA3P52797 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.25□□□□□ -0.29
EFNA3P52797 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.25□□□□□ -0.29
EFNA3P52797 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC13.25□□□□□ -0.29
EFNA3P52797 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.25□□□□□ -0.29
EFNA3P52797 AP001184.1-201ENST00000637936 376 ntBASIC13.25□□□□□ -0.29
EFNA3P52797 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.25□□□□□ -0.29
EFNA3P52797 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.25□□□□□ -0.29
EFNA3P52797 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.25□□□□□ -0.29
EFNA3P52797 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.25□□□□□ -0.29
EFNA3P52797 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
EFNA3P52797 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.25□□□□□ -0.29
EFNA3P52797 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 AC068760.1-201ENST00000493579 1953 ntBASIC13.25□□□□□ -0.29
EFNA3P52797 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
EFNA3P52797 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
EFNA3P52797 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.25□□□□□ -0.29
EFNA3P52797 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 AL009178.2-201ENST00000597278 2719 ntBASIC13.25□□□□□ -0.29
EFNA3P52797 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.25□□□□□ -0.29
EFNA3P52797 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.25□□□□□ -0.29
EFNA3P52797 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
EFNA3P52797 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.24□□□□□ -0.29
EFNA3P52797 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 AC005089.1-201ENST00000619486 2241 ntBASIC13.24□□□□□ -0.29
EFNA3P52797 RPL13AP3-202ENST00000494676 1473 ntBASIC13.24□□□□□ -0.29
EFNA3P52797 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.24□□□□□ -0.29
EFNA3P52797 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
EFNA3P52797 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
EFNA3P52797 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
EFNA3P52797 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.24□□□□□ -0.29
EFNA3P52797 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC13.24□□□□□ -0.29
EFNA3P52797 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
EFNA3P52797 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC13.24□□□□□ -0.29
EFNA3P52797 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.24□□□□□ -0.29
EFNA3P52797 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
EFNA3P52797 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 BX679664.3-201ENST00000414070 555 ntBASIC13.24□□□□□ -0.29
EFNA3P52797 AL592076.1-201ENST00000424448 303 ntBASIC13.24□□□□□ -0.29
EFNA3P52797 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC13.24□□□□□ -0.29
EFNA3P52797 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.24□□□□□ -0.29
EFNA3P52797 AC113935.1-201ENST00000471722 555 ntBASIC13.24□□□□□ -0.29
EFNA3P52797 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 TMCO5B-205ENST00000530020 894 ntBASIC13.24□□□□□ -0.29
EFNA3P52797 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
EFNA3P52797 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC13.24□□□□□ -0.29
EFNA3P52797 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.24□□□□□ -0.29
EFNA3P52797 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.24□□□□□ -0.29
EFNA3P52797 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.24□□□□□ -0.29
EFNA3P52797 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
EFNA3P52797 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.24□□□□□ -0.29
EFNA3P52797 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
EFNA3P52797 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.24□□□□□ -0.29
EFNA3P52797 BAP1-211ENST00000615113 489 ntBASIC13.24□□□□□ -0.29
EFNA3P52797 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 AC005618.3-201ENST00000624928 458 ntBASIC13.24□□□□□ -0.29
EFNA3P52797 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
EFNA3P52797 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.24□□□□□ -0.29
EFNA3P52797 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
EFNA3P52797 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
EFNA3P52797 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.24□□□□□ -0.29
EFNA3P52797 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.24□□□□□ -0.29
EFNA3P52797 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
EFNA3P52797 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
EFNA3P52797 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNA3P52797 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
EFNA3P52797 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.24□□□□□ -0.29
EFNA3P52797 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
EFNA3P52797 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
EFNA3P52797 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms