Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.48□□□□□ -0.25
CLK1P49759 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.48□□□□□ -0.25
CLK1P49759 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.48□□□□□ -0.25
CLK1P49759 AC004466.1-201ENST00000599515 1080 ntBASIC13.48□□□□□ -0.25
CLK1P49759 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.48□□□□□ -0.25
CLK1P49759 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CLK1P49759 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC13.48□□□□□ -0.25
CLK1P49759 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
CLK1P49759 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.48□□□□□ -0.25
CLK1P49759 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
CLK1P49759 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CLK1P49759 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CLK1P49759 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
CLK1P49759 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.47□□□□□ -0.25
CLK1P49759 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
CLK1P49759 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CLK1P49759 FKBP4P6-201ENST00000457486 1332 ntBASIC13.47□□□□□ -0.25
CLK1P49759 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.47□□□□□ -0.25
CLK1P49759 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.47□□□□□ -0.25
CLK1P49759 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.47□□□□□ -0.25
CLK1P49759 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CLK1P49759 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.47□□□□□ -0.25
CLK1P49759 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.47□□□□□ -0.25
CLK1P49759 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 FAM8A4P-201ENST00000435433 1213 ntBASIC13.47□□□□□ -0.25
CLK1P49759 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.47□□□□□ -0.25
CLK1P49759 RPL7P3-201ENST00000441388 714 ntBASIC13.47□□□□□ -0.25
CLK1P49759 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.47□□□□□ -0.25
CLK1P49759 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.47□□□□□ -0.25
CLK1P49759 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.47□□□□□ -0.25
CLK1P49759 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.47□□□□□ -0.25
CLK1P49759 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.47□□□□□ -0.25
CLK1P49759 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CLK1P49759 AC131206.1-201ENST00000538078 1211 ntBASIC13.47□□□□□ -0.25
CLK1P49759 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CLK1P49759 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.47□□□□□ -0.25
CLK1P49759 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.47□□□□□ -0.25
CLK1P49759 BX088702.1-201ENST00000610784 235 ntBASIC13.47□□□□□ -0.25
CLK1P49759 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.47□□□□□ -0.25
CLK1P49759 AL035252.4-201ENST00000624174 288 ntBASIC13.47□□□□□ -0.25
CLK1P49759 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.47□□□□□ -0.25
CLK1P49759 RHOXF1P1-202ENST00000635473 501 ntBASIC13.47□□□□□ -0.25
CLK1P49759 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.47□□□□□ -0.25
CLK1P49759 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CLK1P49759 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.47□□□□□ -0.25
CLK1P49759 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CLK1P49759 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
CLK1P49759 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLK1P49759 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.46□□□□□ -0.25
CLK1P49759 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.46□□□□□ -0.25
CLK1P49759 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CLK1P49759 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.46□□□□□ -0.25
CLK1P49759 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.46□□□□□ -0.25
CLK1P49759 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms