Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 CFL1P6-201ENST00000400899 494 ntBASIC14.25□□□□□ -0.13
LTBRP36941 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBRP36941 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC14.25□□□□□ -0.13
LTBRP36941 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC14.25□□□□□ -0.13
LTBRP36941 ACTG1P23-201ENST00000437653 1074 ntBASIC14.25□□□□□ -0.13
LTBRP36941 AC007279.1-201ENST00000448547 837 ntBASIC14.25□□□□□ -0.13
LTBRP36941 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC14.25□□□□□ -0.13
LTBRP36941 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC14.25□□□□□ -0.13
LTBRP36941 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC14.25□□□□□ -0.13
LTBRP36941 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LTBRP36941 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LTBRP36941 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LTBRP36941 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBRP36941 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LTBRP36941 TCAF2P1-201ENST00000291129 2421 ntBASIC14.25□□□□□ -0.13
LTBRP36941 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBRP36941 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
LTBRP36941 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LTBRP36941 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBRP36941 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LTBRP36941 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LTBRP36941 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.25□□□□□ -0.13
LTBRP36941 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBRP36941 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.25□□□□□ -0.13
LTBRP36941 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LTBRP36941 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.24□□□□□ -0.13
LTBRP36941 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LTBRP36941 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBRP36941 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
LTBRP36941 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBRP36941 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LTBRP36941 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LTBRP36941 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LTBRP36941 AC097474.1-201ENST00000506481 1371 ntBASIC14.24□□□□□ -0.13
LTBRP36941 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.24□□□□□ -0.13
LTBRP36941 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
LTBRP36941 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.24□□□□□ -0.13
LTBRP36941 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBRP36941 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBRP36941 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LTBRP36941 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LTBRP36941 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBRP36941 POP5-201ENST00000341039 913 ntTSL 2 BASIC14.24□□□□□ -0.13
LTBRP36941 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC14.24□□□□□ -0.13
LTBRP36941 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC14.24□□□□□ -0.13
LTBRP36941 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
LTBRP36941 RBMX2P5-201ENST00000424312 969 ntBASIC14.24□□□□□ -0.13
LTBRP36941 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC14.24□□□□□ -0.13
LTBRP36941 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBRP36941 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC14.24□□□□□ -0.13
LTBRP36941 RPSAP16-201ENST00000447583 821 ntBASIC14.24□□□□□ -0.13
LTBRP36941 RNF7-205ENST00000480908 782 ntTSL 4 BASIC14.24□□□□□ -0.13
LTBRP36941 AL450346.2-201ENST00000495602 1024 ntBASIC14.24□□□□□ -0.13
LTBRP36941 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC14.24□□□□□ -0.13
LTBRP36941 TMA16-204ENST00000508268 608 ntTSL 2 BASIC14.24□□□□□ -0.13
LTBRP36941 AC103724.2-201ENST00000520355 476 ntBASIC14.24□□□□□ -0.13
LTBRP36941 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC14.24□□□□□ -0.13
LTBRP36941 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC14.24□□□□□ -0.13
LTBRP36941 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
LTBRP36941 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC14.24□□□□□ -0.13
LTBRP36941 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC14.24□□□□□ -0.13
LTBRP36941 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC14.24□□□□□ -0.13
LTBRP36941 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC14.24□□□□□ -0.13
LTBRP36941 NAT9-204ENST00000578822 839 ntTSL 3 BASIC14.24□□□□□ -0.13
LTBRP36941 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC14.24□□□□□ -0.13
LTBRP36941 AC022001.3-201ENST00000606330 596 ntBASIC14.24□□□□□ -0.13
LTBRP36941 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC14.24□□□□□ -0.13
LTBRP36941 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LTBRP36941 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC14.24□□□□□ -0.13
LTBRP36941 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBRP36941 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LTBRP36941 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBRP36941 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBRP36941 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.24□□□□□ -0.13
LTBRP36941 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBRP36941 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBRP36941 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBRP36941 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.24□□□□□ -0.13
LTBRP36941 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBRP36941 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LTBRP36941 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.24□□□□□ -0.13
LTBRP36941 AL031590.1-202ENST00000641466 1737 ntBASIC14.24□□□□□ -0.13
LTBRP36941 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.24□□□□□ -0.13
LTBRP36941 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LTBRP36941 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.23□□□□□ -0.13
LTBRP36941 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LTBRP36941 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.23□□□□□ -0.13
LTBRP36941 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 CICP14-201ENST00000629111 2732 ntBASIC14.23□□□□□ -0.13
LTBRP36941 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.23□□□□□ -0.13
LTBRP36941 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.23□□□□□ -0.13
LTBRP36941 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.23□□□□□ -0.13
LTBRP36941 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms