Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 HSPA7-201ENST00000445535 1927 ntBASIC13.92□□□□□ -0.18
TRIM23P36406 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.92□□□□□ -0.18
TRIM23P36406 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.92□□□□□ -0.18
TRIM23P36406 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC13.92□□□□□ -0.18
TRIM23P36406 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.92□□□□□ -0.18
TRIM23P36406 RN7SL767P-201ENST00000493013 295 ntBASIC13.92□□□□□ -0.18
TRIM23P36406 RNA5SP417-201ENST00000516459 108 ntBASIC13.92□□□□□ -0.18
TRIM23P36406 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.92□□□□□ -0.18
TRIM23P36406 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC13.92□□□□□ -0.18
TRIM23P36406 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.92□□□□□ -0.18
TRIM23P36406 AC068760.1-201ENST00000493579 1953 ntBASIC13.92□□□□□ -0.18
TRIM23P36406 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRIM23P36406 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRIM23P36406 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRIM23P36406 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.92□□□□□ -0.18
TRIM23P36406 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.91□□□□□ -0.18
TRIM23P36406 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.91□□□□□ -0.18
TRIM23P36406 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
TRIM23P36406 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRIM23P36406 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRIM23P36406 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.91□□□□□ -0.18
TRIM23P36406 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.91□□□□□ -0.18
TRIM23P36406 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 Z69890.1-201ENST00000382990 339 ntBASIC13.91□□□□□ -0.18
TRIM23P36406 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC13.91□□□□□ -0.18
TRIM23P36406 CELP-201ENST00000411440 1249 ntTSL 5 BASIC13.91□□□□□ -0.18
TRIM23P36406 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.91□□□□□ -0.18
TRIM23P36406 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC13.91□□□□□ -0.18
TRIM23P36406 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 NEU3-207ENST00000534628 746 ntTSL 2 BASIC13.91□□□□□ -0.18
TRIM23P36406 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRIM23P36406 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13.91□□□□□ -0.18
TRIM23P36406 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC13.91□□□□□ -0.18
TRIM23P36406 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.91□□□□□ -0.18
TRIM23P36406 AC007952.4-201ENST00000573866 637 ntBASIC13.91□□□□□ -0.18
TRIM23P36406 NUDT4P2-201ENST00000578341 546 ntBASIC13.91□□□□□ -0.18
TRIM23P36406 MIR4265-201ENST00000582152 99 ntBASIC13.91□□□□□ -0.18
TRIM23P36406 MIR4649-201ENST00000582839 64 ntBASIC13.91□□□□□ -0.18
TRIM23P36406 MIR5572-201ENST00000583188 137 ntBASIC13.91□□□□□ -0.18
TRIM23P36406 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 AP000322.3-201ENST00000608665 388 ntBASIC13.91□□□□□ -0.18
TRIM23P36406 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRIM23P36406 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRIM23P36406 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.91□□□□□ -0.18
TRIM23P36406 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRIM23P36406 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.91□□□□□ -0.18
TRIM23P36406 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.91□□□□□ -0.18
TRIM23P36406 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.91□□□□□ -0.18
TRIM23P36406 TBC1D27-202ENST00000424239 1573 ntBASIC13.91□□□□□ -0.18
TRIM23P36406 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRIM23P36406 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.91□□□□□ -0.18
TRIM23P36406 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.91□□□□□ -0.18
TRIM23P36406 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 SBF1P1-201ENST00000444527 5631 ntBASIC13.91□□□□□ -0.18
TRIM23P36406 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRIM23P36406 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM23P36406 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms