Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 PDXDC2P-206ENST00000534700 1315 ntBASIC15.87■□□□□ 0.13
CIITAP33076 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.87■□□□□ 0.13
CIITAP33076 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CIITAP33076 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CIITAP33076 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC15.87■□□□□ 0.13
CIITAP33076 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CIITAP33076 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CIITAP33076 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CIITAP33076 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.87■□□□□ 0.13
CIITAP33076 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
CIITAP33076 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CIITAP33076 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.86■□□□□ 0.13
CIITAP33076 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.86■□□□□ 0.13
CIITAP33076 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CIITAP33076 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
CIITAP33076 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CIITAP33076 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
CIITAP33076 AC015909.5-201ENST00000624336 2266 ntBASIC15.86■□□□□ 0.13
CIITAP33076 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 AC092573.1-201ENST00000433054 884 ntBASIC15.86■□□□□ 0.13
CIITAP33076 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.86■□□□□ 0.13
CIITAP33076 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC15.86■□□□□ 0.13
CIITAP33076 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.86■□□□□ 0.13
CIITAP33076 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.86■□□□□ 0.13
CIITAP33076 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.86■□□□□ 0.13
CIITAP33076 AC007250.1-201ENST00000608934 338 ntBASIC15.86■□□□□ 0.13
CIITAP33076 AC073352.2-201ENST00000609385 439 ntBASIC15.86■□□□□ 0.13
CIITAP33076 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CIITAP33076 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
CIITAP33076 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.86■□□□□ 0.13
CIITAP33076 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC15.86■□□□□ 0.13
CIITAP33076 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.86■□□□□ 0.13
CIITAP33076 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CIITAP33076 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.85■□□□□ 0.13
CIITAP33076 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.85■□□□□ 0.13
CIITAP33076 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CIITAP33076 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.85■□□□□ 0.13
CIITAP33076 AC023794.5-201ENST00000564380 2157 ntBASIC15.85■□□□□ 0.13
CIITAP33076 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.85■□□□□ 0.13
CIITAP33076 RN7SL767P-201ENST00000493013 295 ntBASIC15.85■□□□□ 0.13
CIITAP33076 COQ10BP2-201ENST00000513804 724 ntBASIC15.85■□□□□ 0.13
CIITAP33076 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
CIITAP33076 OR5BD1P-201ENST00000532527 817 ntBASIC15.85■□□□□ 0.13
CIITAP33076 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.85■□□□□ 0.13
CIITAP33076 RPL17P45-201ENST00000586289 509 ntBASIC15.85■□□□□ 0.13
CIITAP33076 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.85■□□□□ 0.13
CIITAP33076 AC092171.5-201ENST00000608012 942 ntBASIC15.85■□□□□ 0.13
CIITAP33076 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
CIITAP33076 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CIITAP33076 GOLGA8UP-201ENST00000527159 1755 ntBASIC15.85■□□□□ 0.13
CIITAP33076 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CIITAP33076 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms