Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12□□□□□ -0.49
COL8A2P25067 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12□□□□□ -0.49
COL8A2P25067 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC12□□□□□ -0.49
COL8A2P25067 RN7SL181P-201ENST00000462921 277 ntBASIC12□□□□□ -0.49
COL8A2P25067 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC12□□□□□ -0.49
COL8A2P25067 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12□□□□□ -0.49
COL8A2P25067 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12□□□□□ -0.49
COL8A2P25067 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12□□□□□ -0.49
COL8A2P25067 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12□□□□□ -0.49
COL8A2P25067 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12□□□□□ -0.49
COL8A2P25067 AL021707.6-201ENST00000609212 491 ntBASIC12□□□□□ -0.49
COL8A2P25067 MIR6842-201ENST00000612539 65 ntBASIC12□□□□□ -0.49
COL8A2P25067 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12□□□□□ -0.49
COL8A2P25067 AC242376.2-201ENST00000619355 883 ntBASIC12□□□□□ -0.49
COL8A2P25067 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12□□□□□ -0.49
COL8A2P25067 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC12□□□□□ -0.49
COL8A2P25067 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12□□□□□ -0.49
COL8A2P25067 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12□□□□□ -0.49
COL8A2P25067 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
COL8A2P25067 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
COL8A2P25067 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12□□□□□ -0.49
COL8A2P25067 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
COL8A2P25067 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
COL8A2P25067 AL591122.2-201ENST00000624125 1853 ntBASIC12□□□□□ -0.49
COL8A2P25067 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
COL8A2P25067 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.99□□□□□ -0.49
COL8A2P25067 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC11.99□□□□□ -0.49
COL8A2P25067 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC11.99□□□□□ -0.49
COL8A2P25067 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.99□□□□□ -0.49
COL8A2P25067 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC11.99□□□□□ -0.49
COL8A2P25067 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
COL8A2P25067 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
COL8A2P25067 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
COL8A2P25067 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
COL8A2P25067 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.99□□□□□ -0.49
COL8A2P25067 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 MIR645-201ENST00000385283 94 ntBASIC11.99□□□□□ -0.49
COL8A2P25067 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 AC006987.1-201ENST00000413610 527 ntBASIC11.99□□□□□ -0.49
COL8A2P25067 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC11.99□□□□□ -0.49
COL8A2P25067 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
COL8A2P25067 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC11.99□□□□□ -0.49
COL8A2P25067 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC11.99□□□□□ -0.49
COL8A2P25067 CHCHD2P9-201ENST00000461726 456 ntBASIC11.99□□□□□ -0.49
COL8A2P25067 RPL18AP8-201ENST00000486071 528 ntBASIC11.99□□□□□ -0.49
COL8A2P25067 MRPL22P1-201ENST00000505398 616 ntBASIC11.99□□□□□ -0.49
COL8A2P25067 AP002803.1-201ENST00000528836 498 ntBASIC11.99□□□□□ -0.49
COL8A2P25067 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 POLD4-208ENST00000532830 904 ntTSL 3 BASIC11.99□□□□□ -0.49
COL8A2P25067 IQSEC3P1-201ENST00000538799 536 ntBASIC11.99□□□□□ -0.49
COL8A2P25067 AL512310.5-201ENST00000551999 515 ntBASIC11.99□□□□□ -0.49
COL8A2P25067 AC135983.4-201ENST00000564116 1262 ntBASIC11.99□□□□□ -0.49
COL8A2P25067 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC11.99□□□□□ -0.49
COL8A2P25067 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
COL8A2P25067 CMC2-224ENST00000630396 481 ntTSL 5 BASIC11.99□□□□□ -0.49
COL8A2P25067 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
COL8A2P25067 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.99□□□□□ -0.49
COL8A2P25067 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC11.99□□□□□ -0.49
COL8A2P25067 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
COL8A2P25067 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.99□□□□□ -0.49
COL8A2P25067 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.99□□□□□ -0.49
COL8A2P25067 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
COL8A2P25067 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
COL8A2P25067 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 310.3 ms