Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB3BP20337 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB3BP20337 AL391280.1-201ENST00000506969 1062 ntBASIC12.5□□□□□ -0.41
RAB3BP20337 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
RAB3BP20337 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB3BP20337 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB3BP20337 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.5□□□□□ -0.41
RAB3BP20337 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
RAB3BP20337 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB3BP20337 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB3BP20337 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAB3BP20337 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.5□□□□□ -0.41
RAB3BP20337 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB3BP20337 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAB3BP20337 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB3BP20337 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB3BP20337 AL121894.2-201ENST00000602977 491 ntBASIC12.5□□□□□ -0.41
RAB3BP20337 MIR8072-201ENST00000614241 80 ntBASIC12.5□□□□□ -0.41
RAB3BP20337 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB3BP20337 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB3BP20337 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RAB3BP20337 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RAB3BP20337 AP000593.2-201ENST00000542775 1433 ntBASIC12.5□□□□□ -0.41
RAB3BP20337 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RAB3BP20337 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB3BP20337 AC009093.2-202ENST00000620513 2079 ntBASIC12.5□□□□□ -0.41
RAB3BP20337 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB3BP20337 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
RAB3BP20337 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB3BP20337 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB3BP20337 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RAB3BP20337 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
RAB3BP20337 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
RAB3BP20337 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
RAB3BP20337 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.49□□□□□ -0.41
RAB3BP20337 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB3BP20337 AC107375.1-201ENST00000564464 2231 ntBASIC12.49□□□□□ -0.41
RAB3BP20337 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB3BP20337 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RAB3BP20337 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.49□□□□□ -0.41
RAB3BP20337 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB3BP20337 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RAB3BP20337 MIR943-201ENST00000401286 94 ntBASIC12.49□□□□□ -0.41
RAB3BP20337 BX842568.4-201ENST00000421222 227 ntBASIC12.49□□□□□ -0.41
RAB3BP20337 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB3BP20337 FAM86GP-201ENST00000448322 971 ntBASIC12.49□□□□□ -0.41
RAB3BP20337 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB3BP20337 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB3BP20337 AC011495.1-201ENST00000498085 584 ntBASIC12.49□□□□□ -0.41
RAB3BP20337 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB3BP20337 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
RAB3BP20337 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB3BP20337 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.49□□□□□ -0.41
RAB3BP20337 AC133539.2-201ENST00000604757 467 ntBASIC12.49□□□□□ -0.41
RAB3BP20337 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.49□□□□□ -0.41
RAB3BP20337 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.49□□□□□ -0.41
RAB3BP20337 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.49□□□□□ -0.41
RAB3BP20337 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.49□□□□□ -0.41
RAB3BP20337 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RAB3BP20337 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB3BP20337 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.49□□□□□ -0.41
RAB3BP20337 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
RAB3BP20337 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms