Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFTRP13569 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CFTRP13569 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CFTRP13569 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
CFTRP13569 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC23.24■■□□□ 1.31
CFTRP13569 AC074019.1-201ENST00000428788 1096 ntBASIC23.24■■□□□ 1.31
CFTRP13569 RPE-208ENST00000436630 1128 ntTSL 2 BASIC23.24■■□□□ 1.31
CFTRP13569 AK2P2-201ENST00000439142 405 ntBASIC23.24■■□□□ 1.31
CFTRP13569 RN7SL76P-201ENST00000482435 289 ntBASIC23.24■■□□□ 1.31
CFTRP13569 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC23.24■■□□□ 1.31
CFTRP13569 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC23.24■■□□□ 1.31
CFTRP13569 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC23.24■■□□□ 1.31
CFTRP13569 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC23.24■■□□□ 1.31
CFTRP13569 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC23.24■■□□□ 1.31
CFTRP13569 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC23.24■■□□□ 1.31
CFTRP13569 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC23.24■■□□□ 1.31
CFTRP13569 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC23.24■■□□□ 1.31
CFTRP13569 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC23.24■■□□□ 1.31
CFTRP13569 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CFTRP13569 FES-204ENST00000414248 2327 ntTSL 2 BASIC23.23■■□□□ 1.31
CFTRP13569 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC23.23■■□□□ 1.31
CFTRP13569 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CFTRP13569 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC23.23■■□□□ 1.31
CFTRP13569 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
CFTRP13569 AGK-211ENST00000629555 2765 ntTSL 5 BASIC23.23■■□□□ 1.31
CFTRP13569 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC23.23■■□□□ 1.31
CFTRP13569 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC23.23■■□□□ 1.31
CFTRP13569 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC23.23■■□□□ 1.31
CFTRP13569 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CFTRP13569 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CFTRP13569 PPP1R2P10-201ENST00000393023 595 ntBASIC23.23■■□□□ 1.31
CFTRP13569 AP000346.2-202ENST00000425948 383 ntBASIC23.23■■□□□ 1.31
CFTRP13569 TMEM256P1-201ENST00000430550 340 ntBASIC23.23■■□□□ 1.31
CFTRP13569 RPL13AP5-201ENST00000439189 612 ntBASIC23.23■■□□□ 1.31
CFTRP13569 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
CFTRP13569 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC23.23■■□□□ 1.31
CFTRP13569 AL139317.2-201ENST00000556998 158 ntBASIC23.23■■□□□ 1.31
CFTRP13569 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC23.23■■□□□ 1.31
CFTRP13569 MIR6165-201ENST00000614803 84 ntBASIC23.23■■□□□ 1.31
CFTRP13569 AC112702.1-201ENST00000623712 366 ntBASIC23.23■■□□□ 1.31
CFTRP13569 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC23.23■■□□□ 1.31
CFTRP13569 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CFTRP13569 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CFTRP13569 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFTRP13569 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFTRP13569 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFTRP13569 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CFTRP13569 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC23.22■■□□□ 1.31
CFTRP13569 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC23.22■■□□□ 1.31
CFTRP13569 WAC-202ENST00000347934 2839 ntTSL 5 BASIC23.22■■□□□ 1.31
CFTRP13569 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC23.22■■□□□ 1.31
CFTRP13569 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFTRP13569 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFTRP13569 AC069421.1-201ENST00000447462 323 ntBASIC23.22■■□□□ 1.31
CFTRP13569 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CFTRP13569 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC23.22■■□□□ 1.31
CFTRP13569 AC104759.1-201ENST00000559109 939 ntBASIC23.22■■□□□ 1.31
CFTRP13569 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC23.22■■□□□ 1.31
CFTRP13569 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC23.22■■□□□ 1.31
CFTRP13569 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC23.22■■□□□ 1.31
CFTRP13569 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC23.22■■□□□ 1.31
CFTRP13569 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFTRP13569 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CFTRP13569 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
CFTRP13569 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CFTRP13569 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFTRP13569 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CFTRP13569 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
CFTRP13569 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CFTRP13569 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC23.21■■□□□ 1.31
CFTRP13569 AC106872.9-201ENST00000512437 1393 ntBASIC23.21■■□□□ 1.31
CFTRP13569 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC23.21■■□□□ 1.31
CFTRP13569 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CFTRP13569 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC23.21■■□□□ 1.31
CFTRP13569 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CFTRP13569 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CFTRP13569 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CFTRP13569 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CFTRP13569 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CFTRP13569 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC23.21■■□□□ 1.31
CFTRP13569 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC23.21■■□□□ 1.31
CFTRP13569 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC23.21■■□□□ 1.31
CFTRP13569 AC136475.9-201ENST00000605240 497 ntBASIC23.21■■□□□ 1.31
CFTRP13569 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CFTRP13569 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC23.21■■□□□ 1.31
CFTRP13569 SRL-202ENST00000537996 1814 ntTSL 2 BASIC23.21■■□□□ 1.31
CFTRP13569 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CFTRP13569 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CFTRP13569 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC23.21■■□□□ 1.31
CFTRP13569 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CFTRP13569 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CFTRP13569 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CFTRP13569 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.31
CFTRP13569 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CFTRP13569 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CFTRP13569 MIR193A-201ENST00000384882 88 ntBASIC23.2■■□□□ 1.3
CFTRP13569 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC23.2■■□□□ 1.3
CFTRP13569 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC23.2■■□□□ 1.3
CFTRP13569 SLC25A51P3-201ENST00000521814 889 ntBASIC23.2■■□□□ 1.3
CFTRP13569 RAB42P1-201ENST00000555078 316 ntBASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms