Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TOP1P11387 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.68■□□□□ 0.26
TOP1P11387 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.68■□□□□ 0.26
TOP1P11387 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TOP1P11387 AC073869.2-201ENST00000417338 1026 ntBASIC16.68■□□□□ 0.26
TOP1P11387 AL807761.2-201ENST00000422849 729 ntBASIC16.68■□□□□ 0.26
TOP1P11387 AC019193.1-201ENST00000506678 823 ntBASIC16.68■□□□□ 0.26
TOP1P11387 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.68■□□□□ 0.26
TOP1P11387 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.68■□□□□ 0.26
TOP1P11387 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.68■□□□□ 0.26
TOP1P11387 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC16.68■□□□□ 0.26
TOP1P11387 AC007326.1-201ENST00000604539 458 ntBASIC16.68■□□□□ 0.26
TOP1P11387 AC009560.1-201ENST00000620208 434 ntBASIC16.68■□□□□ 0.26
TOP1P11387 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC16.68■□□□□ 0.26
TOP1P11387 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.68■□□□□ 0.26
TOP1P11387 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
TOP1P11387 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TOP1P11387 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TOP1P11387 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.68■□□□□ 0.26
TOP1P11387 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TOP1P11387 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TOP1P11387 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TOP1P11387 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
TOP1P11387 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.68■□□□□ 0.26
TOP1P11387 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TOP1P11387 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TOP1P11387 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TOP1P11387 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.68■□□□□ 0.26
TOP1P11387 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TOP1P11387 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TOP1P11387 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TOP1P11387 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TOP1P11387 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.67■□□□□ 0.26
TOP1P11387 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.67■□□□□ 0.26
TOP1P11387 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TOP1P11387 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.67■□□□□ 0.26
TOP1P11387 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.67■□□□□ 0.26
TOP1P11387 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.67■□□□□ 0.26
TOP1P11387 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TOP1P11387 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 AC103592.1-201ENST00000394513 664 ntBASIC16.67■□□□□ 0.26
TOP1P11387 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.67■□□□□ 0.26
TOP1P11387 AL592076.1-201ENST00000424448 303 ntBASIC16.67■□□□□ 0.26
TOP1P11387 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.67■□□□□ 0.26
TOP1P11387 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.67■□□□□ 0.26
TOP1P11387 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
TOP1P11387 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.67■□□□□ 0.26
TOP1P11387 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.67■□□□□ 0.26
TOP1P11387 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.67■□□□□ 0.26
TOP1P11387 AC051619.9-201ENST00000623237 597 ntBASIC16.67■□□□□ 0.26
TOP1P11387 AL353726.2-201ENST00000623259 884 ntBASIC16.67■□□□□ 0.26
TOP1P11387 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TOP1P11387 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.67■□□□□ 0.26
TOP1P11387 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
TOP1P11387 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC16.67■□□□□ 0.26
TOP1P11387 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.67■□□□□ 0.26
TOP1P11387 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.67■□□□□ 0.26
TOP1P11387 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TOP1P11387 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.66■□□□□ 0.26
TOP1P11387 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TOP1P11387 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
TOP1P11387 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TOP1P11387 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TOP1P11387 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.66■□□□□ 0.26
TOP1P11387 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.66■□□□□ 0.26
TOP1P11387 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.66■□□□□ 0.26
TOP1P11387 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms