Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 UCKL1-AS1-201ENST00000623569 3602 ntBASIC11.14□□□□□ -0.63
CD28P10747 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.14□□□□□ -0.63
CD28P10747 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
CD28P10747 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
CD28P10747 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
CD28P10747 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC11.14□□□□□ -0.63
CD28P10747 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.14□□□□□ -0.63
CD28P10747 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
CD28P10747 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
CD28P10747 MIR645-201ENST00000385283 94 ntBASIC11.14□□□□□ -0.63
CD28P10747 HLA-DMA-203ENST00000395305 777 ntBASIC11.14□□□□□ -0.63
CD28P10747 AC012362.1-201ENST00000434906 739 ntBASIC11.14□□□□□ -0.63
CD28P10747 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC11.14□□□□□ -0.63
CD28P10747 RPL18AP8-201ENST00000486071 528 ntBASIC11.14□□□□□ -0.63
CD28P10747 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC11.14□□□□□ -0.63
CD28P10747 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC11.14□□□□□ -0.63
CD28P10747 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC11.14□□□□□ -0.63
CD28P10747 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC11.14□□□□□ -0.63
CD28P10747 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
CD28P10747 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC11.14□□□□□ -0.63
CD28P10747 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
CD28P10747 HERC2P11-201ENST00000562845 725 ntBASIC11.14□□□□□ -0.63
CD28P10747 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC11.14□□□□□ -0.63
CD28P10747 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC11.14□□□□□ -0.63
CD28P10747 AC100756.2-201ENST00000569537 736 ntBASIC11.14□□□□□ -0.63
CD28P10747 NUDT4P2-201ENST00000578341 546 ntBASIC11.14□□□□□ -0.63
CD28P10747 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC11.14□□□□□ -0.63
CD28P10747 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 CYP51A1P3-201ENST00000400072 1428 ntBASIC11.14□□□□□ -0.63
CD28P10747 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC11.14□□□□□ -0.63
CD28P10747 MTHFR-210ENST00000641407 2387 ntBASIC11.14□□□□□ -0.63
CD28P10747 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC11.14□□□□□ -0.63
CD28P10747 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 API5-208ENST00000531273 1868 ntTSL 2 BASIC11.14□□□□□ -0.63
CD28P10747 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC11.14□□□□□ -0.63
CD28P10747 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.14□□□□□ -0.63
CD28P10747 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC11.14□□□□□ -0.63
CD28P10747 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC11.14□□□□□ -0.63
CD28P10747 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CD28P10747 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
CD28P10747 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.13□□□□□ -0.63
CD28P10747 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.13□□□□□ -0.63
CD28P10747 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
CD28P10747 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
CD28P10747 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC11.13□□□□□ -0.63
CD28P10747 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 AC025271.4-201ENST00000621477 1726 ntBASIC11.13□□□□□ -0.63
CD28P10747 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.13□□□□□ -0.63
CD28P10747 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.13□□□□□ -0.63
CD28P10747 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
CD28P10747 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC11.13□□□□□ -0.63
CD28P10747 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
CD28P10747 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC11.13□□□□□ -0.63
CD28P10747 AL161932.2-201ENST00000435436 679 ntBASIC11.13□□□□□ -0.63
CD28P10747 BUD31-205ENST00000456893 512 ntTSL 5 BASIC11.13□□□□□ -0.63
CD28P10747 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC11.13□□□□□ -0.63
CD28P10747 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC11.13□□□□□ -0.63
CD28P10747 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC11.13□□□□□ -0.63
CD28P10747 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC11.13□□□□□ -0.63
CD28P10747 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC11.13□□□□□ -0.63
CD28P10747 GMFG-209ENST00000600322 622 ntTSL 5 BASIC11.13□□□□□ -0.63
CD28P10747 MIR6858-201ENST00000620733 67 ntBASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms