Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.69□□□□□ -0.06
CD48P09326 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.69□□□□□ -0.06
CD48P09326 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
CD48P09326 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CD48P09326 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.69□□□□□ -0.06
CD48P09326 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.69□□□□□ -0.06
CD48P09326 AC011742.3-201ENST00000439053 820 ntBASIC14.69□□□□□ -0.06
CD48P09326 EIF4HP1-201ENST00000453115 687 ntBASIC14.69□□□□□ -0.06
CD48P09326 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.69□□□□□ -0.06
CD48P09326 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.69□□□□□ -0.06
CD48P09326 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.69□□□□□ -0.06
CD48P09326 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.69□□□□□ -0.06
CD48P09326 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.69□□□□□ -0.06
CD48P09326 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.69□□□□□ -0.06
CD48P09326 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CD48P09326 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.69□□□□□ -0.06
CD48P09326 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.69□□□□□ -0.06
CD48P09326 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.69□□□□□ -0.06
CD48P09326 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CD48P09326 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.69□□□□□ -0.06
CD48P09326 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.69□□□□□ -0.06
CD48P09326 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.69□□□□□ -0.06
CD48P09326 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.69□□□□□ -0.06
CD48P09326 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.69□□□□□ -0.06
CD48P09326 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CD48P09326 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CD48P09326 SALL4P6-201ENST00000429385 1691 ntBASIC14.68□□□□□ -0.06
CD48P09326 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CD48P09326 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.68□□□□□ -0.06
CD48P09326 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.68□□□□□ -0.06
CD48P09326 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CD48P09326 AC004623.1-201ENST00000624592 2127 ntBASIC14.68□□□□□ -0.06
CD48P09326 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CD48P09326 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CD48P09326 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.68□□□□□ -0.06
CD48P09326 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CD48P09326 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CD48P09326 RNA5SP359-201ENST00000364838 113 ntBASIC14.68□□□□□ -0.06
CD48P09326 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CD48P09326 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 OR8T1P-201ENST00000421347 918 ntBASIC14.68□□□□□ -0.06
CD48P09326 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.68□□□□□ -0.06
CD48P09326 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.68□□□□□ -0.06
CD48P09326 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.68□□□□□ -0.06
CD48P09326 AC125604.1-201ENST00000496255 707 ntBASIC14.68□□□□□ -0.06
CD48P09326 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.68□□□□□ -0.06
CD48P09326 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.68□□□□□ -0.06
CD48P09326 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CD48P09326 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.68□□□□□ -0.06
CD48P09326 CR392039.2-201ENST00000623182 509 ntBASIC14.68□□□□□ -0.06
CD48P09326 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.68□□□□□ -0.06
CD48P09326 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.68□□□□□ -0.06
CD48P09326 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
CD48P09326 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.68□□□□□ -0.06
CD48P09326 KRT8P21-201ENST00000430398 1491 ntBASIC14.68□□□□□ -0.06
CD48P09326 RPL13AP3-202ENST00000494676 1473 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms