Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBB4AP04350 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBB4AP04350 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBB4AP04350 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TUBB4AP04350 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBB4AP04350 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBB4AP04350 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TUBB4AP04350 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
TUBB4AP04350 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBB4AP04350 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TUBB4AP04350 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TUBB4AP04350 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBB4AP04350 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 LAP3P2-201ENST00000454686 1454 ntBASIC15.23■□□□□ 0.03
TUBB4AP04350 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBB4AP04350 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TUBB4AP04350 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.23■□□□□ 0.03
TUBB4AP04350 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBB4AP04350 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.23■□□□□ 0.03
TUBB4AP04350 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TUBB4AP04350 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBB4AP04350 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.23■□□□□ 0.03
TUBB4AP04350 KRT18P25-201ENST00000508931 1278 ntBASIC15.23■□□□□ 0.03
TUBB4AP04350 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.23■□□□□ 0.03
TUBB4AP04350 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TUBB4AP04350 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.23■□□□□ 0.03
TUBB4AP04350 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBB4AP04350 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.23■□□□□ 0.03
TUBB4AP04350 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.23■□□□□ 0.03
TUBB4AP04350 AC106028.4-201ENST00000614509 607 ntBASIC15.23■□□□□ 0.03
TUBB4AP04350 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.23■□□□□ 0.03
TUBB4AP04350 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBB4AP04350 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TUBB4AP04350 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
TUBB4AP04350 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TUBB4AP04350 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBB4AP04350 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TUBB4AP04350 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TUBB4AP04350 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TUBB4AP04350 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
TUBB4AP04350 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC15.22■□□□□ 0.03
TUBB4AP04350 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.22■□□□□ 0.03
TUBB4AP04350 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TUBB4AP04350 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.22■□□□□ 0.03
TUBB4AP04350 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.22■□□□□ 0.03
TUBB4AP04350 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.22■□□□□ 0.03
TUBB4AP04350 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.22■□□□□ 0.03
TUBB4AP04350 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.22■□□□□ 0.03
TUBB4AP04350 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.22■□□□□ 0.03
TUBB4AP04350 AC027369.6-201ENST00000525520 931 ntBASIC15.22■□□□□ 0.03
TUBB4AP04350 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.22■□□□□ 0.03
TUBB4AP04350 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.22■□□□□ 0.03
TUBB4AP04350 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.22■□□□□ 0.03
TUBB4AP04350 AC008825.2-201ENST00000603374 718 ntBASIC15.22■□□□□ 0.03
TUBB4AP04350 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.22■□□□□ 0.03
TUBB4AP04350 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TUBB4AP04350 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms