Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ARL16-210ENST00000574938 751 ntTSL 2 BASIC11.96□□□□□ -0.49
CD74P04233 AP001160.2-201ENST00000596071 487 ntBASIC11.96□□□□□ -0.49
CD74P04233 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC11.96□□□□□ -0.49
CD74P04233 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
CD74P04233 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CD74P04233 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
CD74P04233 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
CD74P04233 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CD74P04233 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
CD74P04233 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CD74P04233 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC11.96□□□□□ -0.5
CD74P04233 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CD74P04233 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CD74P04233 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC11.96□□□□□ -0.5
CD74P04233 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC11.95□□□□□ -0.5
CD74P04233 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
CD74P04233 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD74P04233 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD74P04233 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD74P04233 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CD74P04233 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CD74P04233 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC11.95□□□□□ -0.5
CD74P04233 SLC7A15P-201ENST00000424028 1363 ntBASIC11.95□□□□□ -0.5
CD74P04233 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD74P04233 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CD74P04233 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CD74P04233 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD74P04233 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
CD74P04233 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CD74P04233 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD74P04233 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
CD74P04233 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CD74P04233 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
CD74P04233 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC11.95□□□□□ -0.5
CD74P04233 URGCP-206ENST00000446958 365 ntTSL 2 BASIC11.95□□□□□ -0.5
CD74P04233 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
CD74P04233 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
CD74P04233 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.95□□□□□ -0.5
CD74P04233 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC11.95□□□□□ -0.5
CD74P04233 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC11.95□□□□□ -0.5
CD74P04233 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.95□□□□□ -0.5
CD74P04233 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.95□□□□□ -0.5
CD74P04233 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC11.95□□□□□ -0.5
CD74P04233 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD74P04233 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CD74P04233 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC11.95□□□□□ -0.5
CD74P04233 AC102953.2-201ENST00000609755 3026 ntBASIC11.95□□□□□ -0.5
CD74P04233 HSPA8P9-201ENST00000485881 1943 ntBASIC11.95□□□□□ -0.5
CD74P04233 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CD74P04233 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC11.95□□□□□ -0.5
CD74P04233 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CD74P04233 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD74P04233 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC11.95□□□□□ -0.5
CD74P04233 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CD74P04233 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD74P04233 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CD74P04233 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CD74P04233 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD74P04233 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
CD74P04233 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC11.94□□□□□ -0.5
CD74P04233 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 SHC1P1-201ENST00000425230 1745 ntBASIC11.94□□□□□ -0.5
CD74P04233 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC11.94□□□□□ -0.5
CD74P04233 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CD74P04233 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 CCT8L1P-201ENST00000465400 1674 ntBASIC11.94□□□□□ -0.5
CD74P04233 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC11.94□□□□□ -0.5
CD74P04233 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC11.94□□□□□ -0.5
CD74P04233 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CD74P04233 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC11.94□□□□□ -0.5
CD74P04233 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CD74P04233 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC11.94□□□□□ -0.5
CD74P04233 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
CD74P04233 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CD74P04233 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CD74P04233 OSM-203ENST00000403463 464 ntTSL 3 BASIC11.94□□□□□ -0.5
CD74P04233 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11.94□□□□□ -0.5
CD74P04233 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC11.94□□□□□ -0.5
CD74P04233 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC11.94□□□□□ -0.5
CD74P04233 ST13P19-201ENST00000442505 1124 ntBASIC11.94□□□□□ -0.5
CD74P04233 FAM86GP-201ENST00000448322 971 ntBASIC11.94□□□□□ -0.5
CD74P04233 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC11.94□□□□□ -0.5
CD74P04233 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC11.94□□□□□ -0.5
CD74P04233 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.94□□□□□ -0.5
CD74P04233 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms