Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
APOBP04114 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
APOBP04114 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 SERF2-204ENST00000402131 586 ntTSL 2 BASIC8.42□□□□□ -1.06
APOBP04114 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC8.42□□□□□ -1.06
APOBP04114 MTND6P4-201ENST00000506002 522 ntBASIC8.42□□□□□ -1.06
APOBP04114 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC8.42□□□□□ -1.06
APOBP04114 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
APOBP04114 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC8.42□□□□□ -1.06
APOBP04114 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC8.42□□□□□ -1.06
APOBP04114 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
APOBP04114 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC8.42□□□□□ -1.06
APOBP04114 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
APOBP04114 CA6-205ENST00000480186 1493 ntTSL 2 BASIC8.42□□□□□ -1.06
APOBP04114 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
APOBP04114 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC8.42□□□□□ -1.06
APOBP04114 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
APOBP04114 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC8.42□□□□□ -1.06
APOBP04114 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
APOBP04114 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC8.42□□□□□ -1.06
APOBP04114 KLK8-203ENST00000347619 555 ntTSL 2 BASIC8.42□□□□□ -1.06
APOBP04114 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC8.42□□□□□ -1.06
APOBP04114 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC8.42□□□□□ -1.06
APOBP04114 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC8.42□□□□□ -1.06
APOBP04114 AC244097.1-201ENST00000621631 1216 ntBASIC8.42□□□□□ -1.06
APOBP04114 HIST1H2APS4-202ENST00000635537 681 ntBASIC8.42□□□□□ -1.06
APOBP04114 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC8.42□□□□□ -1.06
APOBP04114 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC8.42□□□□□ -1.06
APOBP04114 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC8.42□□□□□ -1.06
APOBP04114 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 POR-201ENST00000394893 2532 ntTSL 5 BASIC8.42□□□□□ -1.06
APOBP04114 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
APOBP04114 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
APOBP04114 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC8.42□□□□□ -1.06
APOBP04114 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 TFAM-201ENST00000373895 973 ntTSL 2 BASIC8.42□□□□□ -1.06
APOBP04114 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC8.42□□□□□ -1.06
APOBP04114 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC8.42□□□□□ -1.06
APOBP04114 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC8.42□□□□□ -1.06
APOBP04114 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 AC245884.8-201ENST00000599382 880 ntBASIC8.42□□□□□ -1.06
APOBP04114 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC8.42□□□□□ -1.06
APOBP04114 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC8.42□□□□□ -1.06
APOBP04114 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC8.42□□□□□ -1.06
APOBP04114 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
APOBP04114 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC8.42□□□□□ -1.06
APOBP04114 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
APOBP04114 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
APOBP04114 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC8.42□□□□□ -1.06
APOBP04114 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
APOBP04114 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC8.42□□□□□ -1.06
APOBP04114 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 DDC-212ENST00000615193 1674 ntTSL 3 BASIC8.42□□□□□ -1.06
APOBP04114 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
APOBP04114 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 MIR1249-201ENST00000408671 66 ntBASIC8.42□□□□□ -1.06
APOBP04114 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC8.42□□□□□ -1.06
APOBP04114 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC8.42□□□□□ -1.06
APOBP04114 TMEM256P1-201ENST00000430550 340 ntBASIC8.42□□□□□ -1.06
APOBP04114 AC012066.1-201ENST00000439252 694 ntBASIC8.42□□□□□ -1.06
APOBP04114 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC8.42□□□□□ -1.06
APOBP04114 AC096713.1-201ENST00000514650 978 ntBASIC8.42□□□□□ -1.06
APOBP04114 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC8.42□□□□□ -1.06
APOBP04114 AC104117.1-201ENST00000517817 900 ntBASIC8.42□□□□□ -1.06
APOBP04114 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC8.42□□□□□ -1.06
APOBP04114 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
APOBP04114 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC8.42□□□□□ -1.06
APOBP04114 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 BANP-201ENST00000286122 2368 ntTSL 5 BASIC8.42□□□□□ -1.06
APOBP04114 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
APOBP04114 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
APOBP04114 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
APOBP04114 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
APOBP04114 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC8.41□□□□□ -1.06
APOBP04114 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
APOBP04114 RER1-203ENST00000378513 3000 ntTSL 3 BASIC8.41□□□□□ -1.06
APOBP04114 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms