Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.46□□□□□ -0.25
MT-ND1P03886 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.46□□□□□ -0.25
MT-ND1P03886 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.46□□□□□ -0.25
MT-ND1P03886 AC190387.1-201ENST00000551683 408 ntBASIC13.46□□□□□ -0.25
MT-ND1P03886 TP53TG3HP-202ENST00000569755 579 ntBASIC13.46□□□□□ -0.25
MT-ND1P03886 AC145423.3-201ENST00000615987 467 ntBASIC13.46□□□□□ -0.25
MT-ND1P03886 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.46□□□□□ -0.25
MT-ND1P03886 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
MT-ND1P03886 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MT-ND1P03886 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
MT-ND1P03886 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
MT-ND1P03886 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
MT-ND1P03886 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MT-ND1P03886 AC060814.4-201ENST00000594169 2163 ntBASIC13.46□□□□□ -0.25
MT-ND1P03886 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MT-ND1P03886 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
MT-ND1P03886 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MT-ND1P03886 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MT-ND1P03886 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MT-ND1P03886 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
MT-ND1P03886 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MT-ND1P03886 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MT-ND1P03886 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
MT-ND1P03886 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MT-ND1P03886 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
MT-ND1P03886 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MT-ND1P03886 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MT-ND1P03886 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
MT-ND1P03886 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MT-ND1P03886 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
MT-ND1P03886 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
MT-ND1P03886 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
MT-ND1P03886 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
MT-ND1P03886 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.45□□□□□ -0.26
MT-ND1P03886 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC13.45□□□□□ -0.26
MT-ND1P03886 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.45□□□□□ -0.26
MT-ND1P03886 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
MT-ND1P03886 AC134312.5-201ENST00000568031 1313 ntBASIC13.45□□□□□ -0.26
MT-ND1P03886 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 MSTO2P-201ENST00000314835 1709 ntBASIC13.45□□□□□ -0.26
MT-ND1P03886 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
MT-ND1P03886 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
MT-ND1P03886 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
MT-ND1P03886 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.45□□□□□ -0.26
MT-ND1P03886 ACTG1P3-201ENST00000431775 1114 ntBASIC13.45□□□□□ -0.26
MT-ND1P03886 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.45□□□□□ -0.26
MT-ND1P03886 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.45□□□□□ -0.26
MT-ND1P03886 PTP4A1P2-201ENST00000546033 454 ntBASIC13.45□□□□□ -0.26
MT-ND1P03886 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.45□□□□□ -0.26
MT-ND1P03886 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.45□□□□□ -0.26
MT-ND1P03886 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.45□□□□□ -0.26
MT-ND1P03886 RN7SL48P-201ENST00000579283 293 ntBASIC13.45□□□□□ -0.26
MT-ND1P03886 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.45□□□□□ -0.26
MT-ND1P03886 ENPP7P14-201ENST00000621765 1040 ntBASIC13.45□□□□□ -0.26
MT-ND1P03886 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.45□□□□□ -0.26
MT-ND1P03886 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
MT-ND1P03886 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
MT-ND1P03886 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MT-ND1P03886 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.45□□□□□ -0.26
MT-ND1P03886 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.44□□□□□ -0.26
MT-ND1P03886 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
MT-ND1P03886 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.44□□□□□ -0.26
MT-ND1P03886 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms