Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.26□□□□□ -0.61
IFNA1P01562 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC11.26□□□□□ -0.61
IFNA1P01562 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 AC007967.2-201ENST00000432613 625 ntBASIC11.26□□□□□ -0.61
IFNA1P01562 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC11.26□□□□□ -0.61
IFNA1P01562 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC11.26□□□□□ -0.61
IFNA1P01562 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.26□□□□□ -0.61
IFNA1P01562 AL662844.1-201ENST00000546340 181 ntBASIC11.26□□□□□ -0.61
IFNA1P01562 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC11.26□□□□□ -0.61
IFNA1P01562 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC11.26□□□□□ -0.61
IFNA1P01562 AC104506.1-201ENST00000609247 429 ntBASIC11.26□□□□□ -0.61
IFNA1P01562 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 AP001002.3-201ENST00000623482 206 ntBASIC11.26□□□□□ -0.61
IFNA1P01562 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC11.26□□□□□ -0.61
IFNA1P01562 AC092902.6-201ENST00000641783 218 ntBASIC11.26□□□□□ -0.61
IFNA1P01562 AC080128.2-201ENST00000641520 11863 ntBASIC11.26□□□□□ -0.61
IFNA1P01562 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC11.26□□□□□ -0.61
IFNA1P01562 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
IFNA1P01562 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC11.26□□□□□ -0.61
IFNA1P01562 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC11.26□□□□□ -0.61
IFNA1P01562 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC11.26□□□□□ -0.61
IFNA1P01562 PLEKHG4-204ENST00000427155 4455 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
IFNA1P01562 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC11.26□□□□□ -0.61
IFNA1P01562 PLEKHH1-201ENST00000329153 6604 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
IFNA1P01562 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
IFNA1P01562 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC11.26□□□□□ -0.61
IFNA1P01562 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC11.26□□□□□ -0.61
IFNA1P01562 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
IFNA1P01562 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC11.25□□□□□ -0.61
IFNA1P01562 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
IFNA1P01562 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
IFNA1P01562 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
IFNA1P01562 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC11.25□□□□□ -0.61
IFNA1P01562 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC11.25□□□□□ -0.61
IFNA1P01562 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
IFNA1P01562 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
IFNA1P01562 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC11.25□□□□□ -0.61
IFNA1P01562 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC11.25□□□□□ -0.61
IFNA1P01562 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.25□□□□□ -0.61
IFNA1P01562 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC11.25□□□□□ -0.61
IFNA1P01562 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 AL161932.2-201ENST00000435436 679 ntBASIC11.25□□□□□ -0.61
IFNA1P01562 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC11.25□□□□□ -0.61
IFNA1P01562 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.25□□□□□ -0.61
IFNA1P01562 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.25□□□□□ -0.61
IFNA1P01562 UNC93B7-201ENST00000509439 705 ntBASIC11.25□□□□□ -0.61
IFNA1P01562 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.25□□□□□ -0.61
IFNA1P01562 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.25□□□□□ -0.61
IFNA1P01562 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
IFNA1P01562 TIMM17BP1-201ENST00000545713 516 ntBASIC11.25□□□□□ -0.61
IFNA1P01562 AC040169.1-201ENST00000565382 521 ntBASIC11.25□□□□□ -0.61
IFNA1P01562 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC11.25□□□□□ -0.61
IFNA1P01562 AC107373.2-201ENST00000607735 490 ntBASIC11.25□□□□□ -0.61
IFNA1P01562 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC11.25□□□□□ -0.61
IFNA1P01562 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.25□□□□□ -0.61
IFNA1P01562 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 AC012313.10-201ENST00000623509 926 ntBASIC11.25□□□□□ -0.61
IFNA1P01562 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
IFNA1P01562 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
IFNA1P01562 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC11.25□□□□□ -0.61
IFNA1P01562 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC11.25□□□□□ -0.61
IFNA1P01562 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC11.25□□□□□ -0.61
IFNA1P01562 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 AOC4P-203ENST00000566825 2289 ntBASIC11.25□□□□□ -0.61
IFNA1P01562 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
IFNA1P01562 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms