Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC135586.1-201ENST00000539323 574 ntBASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 AL390955.2-201ENST00000603032 514 ntBASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 AC138696.2-201ENST00000607376 223 ntBASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 CR392039.2-201ENST00000623182 509 ntBASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 Z92544.3-201ENST00000624747 417 ntBASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 AC004840.1-201ENST00000636359 365 ntBASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 AC134407.3-201ENST00000624035 2139 ntBASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 GOLGA8EP-201ENST00000530246 1959 ntBASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP3Q9Y2W7 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 ABCD1P2-201ENST00000429313 1601 ntBASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 AL359845.1-201ENST00000458202 1648 ntBASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 AC241585.1-201ENST00000433527 519 ntBASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 AL589987.1-201ENST00000453380 819 ntBASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 AC112482.1-201ENST00000492080 688 ntBASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 AC067863.1-201ENST00000494933 530 ntBASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 TPRX2P-201ENST00000535362 881 ntBASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 AC002472.3-201ENST00000640124 621 ntBASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms