Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 TFAM-201ENST00000373895 973 ntTSL 2 BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 AL161932.2-201ENST00000435436 679 ntBASIC12.78□□□□□ -0.36
CHD8Q9HCK8 AC079250.1-201ENST00000456046 531 ntBASIC12.78□□□□□ -0.36
CHD8Q9HCK8 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 AC009238.3-201ENST00000512705 217 ntBASIC12.78□□□□□ -0.36
CHD8Q9HCK8 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 RN7SL162P-201ENST00000579233 292 ntBASIC12.78□□□□□ -0.36
CHD8Q9HCK8 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHD8Q9HCK8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CHD8Q9HCK8 SSR3-202ENST00000463503 596 ntTSL 4 BASIC12.77□□□□□ -0.36
CHD8Q9HCK8 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHD8Q9HCK8 SNHG15-209ENST00000584686 541 ntTSL 3 BASIC12.77□□□□□ -0.36
CHD8Q9HCK8 AL136084.3-201ENST00000605631 439 ntBASIC12.77□□□□□ -0.36
CHD8Q9HCK8 MIR8071-1-201ENST00000616769 65 ntBASIC12.77□□□□□ -0.36
CHD8Q9HCK8 MIR8071-2-201ENST00000616772 65 ntBASIC12.77□□□□□ -0.36
CHD8Q9HCK8 AL139158.3-201ENST00000641212 1562 ntBASIC12.77□□□□□ -0.36
CHD8Q9HCK8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.77□□□□□ -0.36
CHD8Q9HCK8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.77□□□□□ -0.36
CHD8Q9HCK8 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.77□□□□□ -0.36
CHD8Q9HCK8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CHD8Q9HCK8 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
CHD8Q9HCK8 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC12.77□□□□□ -0.36
CHD8Q9HCK8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHD8Q9HCK8 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 CDA-201ENST00000375071 963 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 AL138902.1-201ENST00000437965 856 ntTSL 3 BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 COQ10BP2-201ENST00000513804 724 ntBASIC12.77□□□□□ -0.37
CHD8Q9HCK8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 AC005336.1-201ENST00000585431 1243 ntBASIC12.77□□□□□ -0.37
CHD8Q9HCK8 CYP4F10P-201ENST00000589560 752 ntBASIC12.77□□□□□ -0.37
CHD8Q9HCK8 AP006621.5-202ENST00000623692 636 ntBASIC12.77□□□□□ -0.37
CHD8Q9HCK8 UBA3-212ENST00000630585 390 ntTSL 4 BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 KRT8P25-201ENST00000473150 1456 ntBASIC12.77□□□□□ -0.37
CHD8Q9HCK8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CHD8Q9HCK8 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 AKR1C5P-201ENST00000427165 609 ntBASIC12.76□□□□□ -0.37
CHD8Q9HCK8 AC087163.1-201ENST00000430089 381 ntBASIC12.76□□□□□ -0.37
CHD8Q9HCK8 FLNC-AS1-201ENST00000469965 559 ntTSL 4 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 AC016304.1-201ENST00000476363 413 ntBASIC12.76□□□□□ -0.37
CHD8Q9HCK8 EEF1DP8-201ENST00000534760 536 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms