Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.98□□□□□ -0.33
USB1Q9BQ65 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 H3F3A-203ENST00000366815 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 AC011742.3-201ENST00000439053 820 ntBASIC12.97□□□□□ -0.33
USB1Q9BQ65 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 AC099548.2-209ENST00000480264 625 ntBASIC12.97□□□□□ -0.33
USB1Q9BQ65 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 AC115989.2-201ENST00000578640 563 ntBASIC12.97□□□□□ -0.33
USB1Q9BQ65 BNIP3P13-201ENST00000599968 566 ntBASIC12.97□□□□□ -0.33
USB1Q9BQ65 AC027601.3-201ENST00000622907 509 ntBASIC12.97□□□□□ -0.33
USB1Q9BQ65 AL162426.1-201ENST00000624141 743 ntBASIC12.97□□□□□ -0.33
USB1Q9BQ65 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.97□□□□□ -0.33
USB1Q9BQ65 AC023090.2-201ENST00000625182 2110 ntBASIC12.97□□□□□ -0.33
USB1Q9BQ65 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
USB1Q9BQ65 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
USB1Q9BQ65 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
USB1Q9BQ65 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
USB1Q9BQ65 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
USB1Q9BQ65 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
USB1Q9BQ65 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
USB1Q9BQ65 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
USB1Q9BQ65 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
USB1Q9BQ65 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
USB1Q9BQ65 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 USP9YP19-201ENST00000412165 485 ntBASIC12.96□□□□□ -0.33
USB1Q9BQ65 AL391863.1-201ENST00000422776 743 ntTSL 3 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 AC003075.1-206ENST00000448664 541 ntTSL 3 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
USB1Q9BQ65 AC082651.2-201ENST00000496833 166 ntBASIC12.96□□□□□ -0.33
USB1Q9BQ65 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 AC068733.1-201ENST00000532430 1288 ntTSL 2 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms