Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.68□□□□□ -0.38
RFT1Q96AA3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RFT1Q96AA3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.68□□□□□ -0.38
RFT1Q96AA3 ENPP7P5-201ENST00000541031 1031 ntBASIC12.68□□□□□ -0.38
RFT1Q96AA3 KRT18P8-201ENST00000581937 1246 ntBASIC12.68□□□□□ -0.38
RFT1Q96AA3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.68□□□□□ -0.38
RFT1Q96AA3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.68□□□□□ -0.38
RFT1Q96AA3 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
RFT1Q96AA3 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
RFT1Q96AA3 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RFT1Q96AA3 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.68□□□□□ -0.38
RFT1Q96AA3 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 CLUHP2-201ENST00000426660 1303 ntBASIC12.67□□□□□ -0.38
RFT1Q96AA3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 AC022137.2-201ENST00000503482 481 ntBASIC12.67□□□□□ -0.38
RFT1Q96AA3 AC027796.2-201ENST00000575326 344 ntBASIC12.67□□□□□ -0.38
RFT1Q96AA3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 MARK2P9-201ENST00000430958 1727 ntBASIC12.67□□□□□ -0.38
RFT1Q96AA3 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 Z98257.2-202ENST00000641138 1548 ntBASIC12.67□□□□□ -0.38
RFT1Q96AA3 AL355102.3-201ENST00000554299 1678 ntBASIC12.67□□□□□ -0.38
RFT1Q96AA3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFT1Q96AA3 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
RFT1Q96AA3 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 PCDHA6-201ENST00000378126 3267 ntBASIC12.66□□□□□ -0.38
RFT1Q96AA3 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.66□□□□□ -0.38
RFT1Q96AA3 AL022323.5-201ENST00000624101 2059 ntBASIC12.66□□□□□ -0.38
RFT1Q96AA3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms