Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 AC131235.2-201ENST00000445553 1057 ntBASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 ATF4P4-201ENST00000393544 1930 ntBASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 RPS6-201ENST00000315377 863 ntTSL 3 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 RNF7-202ENST00000393000 805 ntTSL 2 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 DNM1P48-201ENST00000419538 439 ntBASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 AC074019.1-201ENST00000428788 1096 ntBASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 AC092284.1-201ENST00000511386 1289 ntBASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 AC073592.10-201ENST00000624789 597 ntBASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 AC105424.1-201ENST00000514583 209 ntBASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 FAM213AP2-201ENST00000521579 683 ntBASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 snoZ6.3-201ENST00000583496 76 ntBASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 PSME3-213ENST00000592169 826 ntTSL 3 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 AL158032.2-201ENST00000616818 195 ntBASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 MIR4309-201ENST00000582498 83 ntBASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 AC245369.8-201ENST00000636589 306 ntBASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 RN7SL487P-201ENST00000468140 344 ntBASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 MIR1587-201ENST00000583319 53 ntBASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 AC244097.1-201ENST00000621631 1216 ntBASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 AC093462.1-201ENST00000621167 1683 ntBASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 FAM90A27P-201ENST00000593323 1370 ntBASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 FAM90A28P-202ENST00000597191 1374 ntBASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms