Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 RN7SL340P-201ENST00000470792 296 ntBASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 IGHVII-33-1-201ENST00000524010 280 ntBASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 ALOX12P1-201ENST00000579299 1229 ntBASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 AL133551.1-201ENST00000610279 1222 ntBASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 SRL-202ENST00000537996 1814 ntTSL 2 BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 AL139424.2-202ENST00000641335 1369 ntBASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 DDC-212ENST00000615193 1674 ntTSL 3 BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 OR7E122P-201ENST00000383606 1017 ntBASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 AC090825.2-201ENST00000557959 739 ntBASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 AL589743.3-201ENST00000604121 517 ntBASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL22A1Q8NFW1 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 TEDDM2P-201ENST00000414169 786 ntBASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 AC131274.3-201ENST00000578745 1271 ntBASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 AC091736.1-201ENST00000609370 305 ntBASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 FAM90A27P-201ENST00000593323 1370 ntBASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 FAM90A28P-202ENST00000597191 1374 ntBASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL22A1Q8NFW1 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 OR2A1-AS1-203ENST00000468575 568 ntBASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 AC018868.2-201ENST00000559655 1259 ntBASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 MIR6871-201ENST00000613433 56 ntBASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 AC010335.3-201ENST00000623767 531 ntBASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms