Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRA2BP62995 AC015967.2-201ENST00000624092 234 ntBASIC13.37□□□□□ -0.27
TRA2BP62995 AC006435.4-201ENST00000625037 234 ntBASIC13.37□□□□□ -0.27
TRA2BP62995 AL356737.1-201ENST00000634391 234 ntBASIC13.37□□□□□ -0.27
TRA2BP62995 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.37□□□□□ -0.27
TRA2BP62995 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRA2BP62995 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.37□□□□□ -0.27
TRA2BP62995 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRA2BP62995 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
TRA2BP62995 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRA2BP62995 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.37□□□□□ -0.27
TRA2BP62995 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRA2BP62995 AL157791.1-201ENST00000553667 1699 ntBASIC13.37□□□□□ -0.27
TRA2BP62995 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.37□□□□□ -0.27
TRA2BP62995 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRA2BP62995 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.37□□□□□ -0.27
TRA2BP62995 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.37□□□□□ -0.27
TRA2BP62995 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRA2BP62995 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRA2BP62995 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.37□□□□□ -0.27
TRA2BP62995 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.37□□□□□ -0.27
TRA2BP62995 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
TRA2BP62995 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.37□□□□□ -0.27
TRA2BP62995 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRA2BP62995 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
TRA2BP62995 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.36□□□□□ -0.27
TRA2BP62995 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRA2BP62995 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.36□□□□□ -0.27
TRA2BP62995 FMO6P-201ENST00000236166 1620 ntBASIC13.36□□□□□ -0.27
TRA2BP62995 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRA2BP62995 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.36□□□□□ -0.27
TRA2BP62995 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRA2BP62995 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRA2BP62995 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC13.36□□□□□ -0.27
TRA2BP62995 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
TRA2BP62995 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 AC016700.1-201ENST00000429424 312 ntBASIC13.36□□□□□ -0.27
TRA2BP62995 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.36□□□□□ -0.27
TRA2BP62995 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.36□□□□□ -0.27
TRA2BP62995 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.36□□□□□ -0.27
TRA2BP62995 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.36□□□□□ -0.27
TRA2BP62995 AC005740.1-201ENST00000515639 522 ntBASIC13.36□□□□□ -0.27
TRA2BP62995 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.36□□□□□ -0.27
TRA2BP62995 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.36□□□□□ -0.27
TRA2BP62995 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.36□□□□□ -0.27
TRA2BP62995 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.36□□□□□ -0.27
TRA2BP62995 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.36□□□□□ -0.27
TRA2BP62995 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.36□□□□□ -0.27
TRA2BP62995 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRA2BP62995 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.36□□□□□ -0.27
TRA2BP62995 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.36□□□□□ -0.27
TRA2BP62995 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TRA2BP62995 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 FRMPD2B-201ENST00000431305 1347 ntBASIC13.36□□□□□ -0.27
TRA2BP62995 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.36□□□□□ -0.27
TRA2BP62995 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRA2BP62995 AC004554.1-201ENST00000422830 1468 ntBASIC13.36□□□□□ -0.27
TRA2BP62995 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRA2BP62995 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRA2BP62995 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.35□□□□□ -0.27
TRA2BP62995 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRA2BP62995 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRA2BP62995 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRA2BP62995 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
TRA2BP62995 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.35□□□□□ -0.27
TRA2BP62995 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TRA2BP62995 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRA2BP62995 AL358781.1-202ENST00000321081 1360 ntBASIC13.35□□□□□ -0.27
TRA2BP62995 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TRA2BP62995 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRA2BP62995 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRA2BP62995 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TRA2BP62995 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRA2BP62995 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.35□□□□□ -0.27
TRA2BP62995 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRA2BP62995 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.35□□□□□ -0.27
TRA2BP62995 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms