Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RN7SL560P-201ENST00000577943 264 ntBASIC12.57□□□□□ -0.4
SEC61A1P61619 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.57□□□□□ -0.4
SEC61A1P61619 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.57□□□□□ -0.4
SEC61A1P61619 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC61A1P61619 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC61A1P61619 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SEC61A1P61619 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SEC61A1P61619 AC012617.1-204ENST00000586340 2305 ntBASIC12.57□□□□□ -0.4
SEC61A1P61619 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC61A1P61619 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.57□□□□□ -0.4
SEC61A1P61619 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.57□□□□□ -0.4
SEC61A1P61619 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SEC61A1P61619 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC61A1P61619 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SEC61A1P61619 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SEC61A1P61619 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
SEC61A1P61619 TUBB1P2-201ENST00000422712 1306 ntBASIC12.57□□□□□ -0.4
SEC61A1P61619 TUBB1P1-201ENST00000503144 1300 ntBASIC12.57□□□□□ -0.4
SEC61A1P61619 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.57□□□□□ -0.4
SEC61A1P61619 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC61A1P61619 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.57□□□□□ -0.4
SEC61A1P61619 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.57□□□□□ -0.4
SEC61A1P61619 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SEC61A1P61619 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SEC61A1P61619 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SEC61A1P61619 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC61A1P61619 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC61A1P61619 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
SEC61A1P61619 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 PCDHA5-203ENST00000614258 4248 ntBASIC12.56□□□□□ -0.4
SEC61A1P61619 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC61A1P61619 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC61A1P61619 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC61A1P61619 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.56□□□□□ -0.4
SEC61A1P61619 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
SEC61A1P61619 POM121L8P-201ENST00000417732 1281 ntBASIC12.56□□□□□ -0.4
SEC61A1P61619 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.56□□□□□ -0.4
SEC61A1P61619 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.56□□□□□ -0.4
SEC61A1P61619 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC61A1P61619 ACTBP11-201ENST00000436287 1126 ntBASIC12.56□□□□□ -0.4
SEC61A1P61619 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.56□□□□□ -0.4
SEC61A1P61619 POM121L9P-203ENST00000441984 1285 ntBASIC12.56□□□□□ -0.4
SEC61A1P61619 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.56□□□□□ -0.4
SEC61A1P61619 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.56□□□□□ -0.4
SEC61A1P61619 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 AP006547.1-201ENST00000563435 692 ntBASIC12.56□□□□□ -0.4
SEC61A1P61619 DUX4L45-201ENST00000566406 1057 ntBASIC12.56□□□□□ -0.4
SEC61A1P61619 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.56□□□□□ -0.4
SEC61A1P61619 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.56□□□□□ -0.4
SEC61A1P61619 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.56□□□□□ -0.4
SEC61A1P61619 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC61A1P61619 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC61A1P61619 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SEC61A1P61619 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.56□□□□□ -0.4
SEC61A1P61619 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.56□□□□□ -0.4
SEC61A1P61619 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC61A1P61619 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC61A1P61619 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC61A1P61619 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.55□□□□□ -0.4
SEC61A1P61619 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SEC61A1P61619 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.55□□□□□ -0.4
SEC61A1P61619 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.55□□□□□ -0.4
SEC61A1P61619 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.55□□□□□ -0.4
SEC61A1P61619 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.55□□□□□ -0.4
SEC61A1P61619 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.55□□□□□ -0.4
SEC61A1P61619 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms