Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNA3P52797 AC074138.1-201ENST00000611182 1303 ntBASIC13.27□□□□□ -0.29
EFNA3P52797 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNA3P52797 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
EFNA3P52797 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
EFNA3P52797 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
EFNA3P52797 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.27□□□□□ -0.29
EFNA3P52797 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.27□□□□□ -0.29
EFNA3P52797 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNA3P52797 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNA3P52797 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNA3P52797 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNA3P52797 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNA3P52797 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNA3P52797 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNA3P52797 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.27□□□□□ -0.29
EFNA3P52797 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNA3P52797 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNA3P52797 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNA3P52797 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
EFNA3P52797 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
EFNA3P52797 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.27□□□□□ -0.29
EFNA3P52797 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.27□□□□□ -0.29
EFNA3P52797 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.26□□□□□ -0.29
EFNA3P52797 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
EFNA3P52797 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
EFNA3P52797 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.26□□□□□ -0.29
EFNA3P52797 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.26□□□□□ -0.29
EFNA3P52797 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13.26□□□□□ -0.29
EFNA3P52797 NOC2LP1-201ENST00000450578 752 ntBASIC13.26□□□□□ -0.29
EFNA3P52797 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
EFNA3P52797 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.26□□□□□ -0.29
EFNA3P52797 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC13.26□□□□□ -0.29
EFNA3P52797 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC13.26□□□□□ -0.29
EFNA3P52797 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
EFNA3P52797 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC13.26□□□□□ -0.29
EFNA3P52797 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.26□□□□□ -0.29
EFNA3P52797 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.26□□□□□ -0.29
EFNA3P52797 MT3-203ENST00000565838 421 ntTSL 3 BASIC13.26□□□□□ -0.29
EFNA3P52797 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC13.26□□□□□ -0.29
EFNA3P52797 RN7SL190P-201ENST00000582519 257 ntBASIC13.26□□□□□ -0.29
EFNA3P52797 MIR5572-201ENST00000583188 137 ntBASIC13.26□□□□□ -0.29
EFNA3P52797 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC13.26□□□□□ -0.29
EFNA3P52797 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.26□□□□□ -0.29
EFNA3P52797 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
EFNA3P52797 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC13.26□□□□□ -0.29
EFNA3P52797 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.26□□□□□ -0.29
EFNA3P52797 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
EFNA3P52797 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.26□□□□□ -0.29
EFNA3P52797 AL353726.2-201ENST00000623259 884 ntBASIC13.26□□□□□ -0.29
EFNA3P52797 AC090643.2-201ENST00000623442 2029 ntBASIC13.26□□□□□ -0.29
EFNA3P52797 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.26□□□□□ -0.29
EFNA3P52797 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.26□□□□□ -0.29
EFNA3P52797 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
EFNA3P52797 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
EFNA3P52797 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.25□□□□□ -0.29
EFNA3P52797 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
EFNA3P52797 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.25□□□□□ -0.29
EFNA3P52797 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.25□□□□□ -0.29
EFNA3P52797 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
EFNA3P52797 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
EFNA3P52797 KRT8P43-201ENST00000406052 1458 ntBASIC13.25□□□□□ -0.29
EFNA3P52797 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
EFNA3P52797 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.25□□□□□ -0.29
EFNA3P52797 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
EFNA3P52797 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNA3P52797 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC13.25□□□□□ -0.29
EFNA3P52797 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms