Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 AC135983.4-201ENST00000564116 1262 ntBASIC12.63□□□□□ -0.39
LHX2P50458 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 AC005618.3-201ENST00000624928 458 ntBASIC12.63□□□□□ -0.39
LHX2P50458 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12.63□□□□□ -0.39
LHX2P50458 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
LHX2P50458 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.63□□□□□ -0.39
LHX2P50458 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.63□□□□□ -0.39
LHX2P50458 RCC2P1-201ENST00000452257 1476 ntBASIC12.63□□□□□ -0.39
LHX2P50458 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.63□□□□□ -0.39
LHX2P50458 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 MST1P2-201ENST00000457982 2291 ntBASIC12.63□□□□□ -0.39
LHX2P50458 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LHX2P50458 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LHX2P50458 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LHX2P50458 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LHX2P50458 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.62□□□□□ -0.39
LHX2P50458 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LHX2P50458 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.62□□□□□ -0.39
LHX2P50458 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.62□□□□□ -0.39
LHX2P50458 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
LHX2P50458 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LHX2P50458 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
LHX2P50458 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LHX2P50458 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LHX2P50458 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
LHX2P50458 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.62□□□□□ -0.39
LHX2P50458 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.62□□□□□ -0.39
LHX2P50458 TBC1D27-202ENST00000424239 1573 ntBASIC12.62□□□□□ -0.39
LHX2P50458 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
LHX2P50458 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC12.62□□□□□ -0.39
LHX2P50458 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC12.62□□□□□ -0.39
LHX2P50458 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LHX2P50458 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.62□□□□□ -0.39
LHX2P50458 HIST2H2BA-201ENST00000412169 381 ntBASIC12.62□□□□□ -0.39
LHX2P50458 RPSAP31-201ENST00000416648 895 ntBASIC12.62□□□□□ -0.39
LHX2P50458 RPL7P35-201ENST00000446943 740 ntBASIC12.62□□□□□ -0.39
LHX2P50458 AC008267.1-201ENST00000474858 1069 ntBASIC12.62□□□□□ -0.39
LHX2P50458 IQSEC3P1-201ENST00000538799 536 ntBASIC12.62□□□□□ -0.39
LHX2P50458 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LHX2P50458 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.62□□□□□ -0.39
LHX2P50458 NPM1P43-201ENST00000558669 786 ntBASIC12.62□□□□□ -0.39
LHX2P50458 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.62□□□□□ -0.39
LHX2P50458 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC12.62□□□□□ -0.39
LHX2P50458 MIR4265-201ENST00000582152 99 ntBASIC12.62□□□□□ -0.39
LHX2P50458 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC12.62□□□□□ -0.39
LHX2P50458 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.62□□□□□ -0.39
LHX2P50458 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
LHX2P50458 AC011491.1-203ENST00000637688 543 ntBASIC12.62□□□□□ -0.39
LHX2P50458 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LHX2P50458 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LHX2P50458 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LHX2P50458 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LHX2P50458 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
LHX2P50458 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.62□□□□□ -0.39
LHX2P50458 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LHX2P50458 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LHX2P50458 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LHX2P50458 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LHX2P50458 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
LHX2P50458 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
LHX2P50458 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LHX2P50458 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LHX2P50458 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LHX2P50458 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LHX2P50458 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LHX2P50458 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LHX2P50458 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LHX2P50458 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LHX2P50458 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LHX2P50458 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.61□□□□□ -0.39
LHX2P50458 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
LHX2P50458 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LHX2P50458 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.61□□□□□ -0.39
LHX2P50458 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.61□□□□□ -0.39
LHX2P50458 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LHX2P50458 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LHX2P50458 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LHX2P50458 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LHX2P50458 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.61□□□□□ -0.39
LHX2P50458 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.61□□□□□ -0.39
LHX2P50458 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LHX2P50458 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
LHX2P50458 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.61□□□□□ -0.39
LHX2P50458 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.61□□□□□ -0.39
LHX2P50458 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LHX2P50458 Z69890.1-201ENST00000382990 339 ntBASIC12.61□□□□□ -0.39
LHX2P50458 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
LHX2P50458 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LHX2P50458 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LHX2P50458 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.61□□□□□ -0.39
LHX2P50458 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LHX2P50458 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LHX2P50458 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC12.61□□□□□ -0.39
LHX2P50458 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms