Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 HMGB1P24-201ENST00000611897 328 ntBASIC16.79■□□□□ 0.28
TNNI2P48788 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TNNI2P48788 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.79■□□□□ 0.28
TNNI2P48788 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
TNNI2P48788 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC16.79■□□□□ 0.28
TNNI2P48788 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNNI2P48788 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNNI2P48788 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.79■□□□□ 0.28
TNNI2P48788 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNNI2P48788 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNNI2P48788 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.78■□□□□ 0.28
TNNI2P48788 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNNI2P48788 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
TNNI2P48788 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNNI2P48788 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNNI2P48788 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.78■□□□□ 0.28
TNNI2P48788 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.78■□□□□ 0.28
TNNI2P48788 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TNNI2P48788 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.78■□□□□ 0.28
TNNI2P48788 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNNI2P48788 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNNI2P48788 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TNNI2P48788 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNNI2P48788 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.78■□□□□ 0.28
TNNI2P48788 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.78■□□□□ 0.28
TNNI2P48788 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
TNNI2P48788 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
TNNI2P48788 AC097359.2-201ENST00000604992 2389 ntBASIC16.78■□□□□ 0.28
TNNI2P48788 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.78■□□□□ 0.28
TNNI2P48788 AC092053.3-201ENST00000641308 4975 ntBASIC16.78■□□□□ 0.28
TNNI2P48788 AP001267.2-201ENST00000532619 2086 ntBASIC16.78■□□□□ 0.28
TNNI2P48788 AC232323.1-201ENST00000540724 2099 ntBASIC16.78■□□□□ 0.28
TNNI2P48788 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TNNI2P48788 MIR1301-201ENST00000408518 82 ntBASIC16.78■□□□□ 0.28
TNNI2P48788 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.78■□□□□ 0.28
TNNI2P48788 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.78■□□□□ 0.28
TNNI2P48788 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNNI2P48788 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.78■□□□□ 0.28
TNNI2P48788 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.78■□□□□ 0.28
TNNI2P48788 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNNI2P48788 AC090136.2-201ENST00000517809 420 ntBASIC16.78■□□□□ 0.28
TNNI2P48788 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC16.78■□□□□ 0.28
TNNI2P48788 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC16.78■□□□□ 0.28
TNNI2P48788 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC16.78■□□□□ 0.28
TNNI2P48788 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC16.78■□□□□ 0.28
TNNI2P48788 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC16.78■□□□□ 0.28
TNNI2P48788 AC010632.2-201ENST00000588369 1224 ntBASIC16.78■□□□□ 0.28
TNNI2P48788 AC012073.1-201ENST00000606114 1108 ntBASIC16.78■□□□□ 0.28
TNNI2P48788 AC008972.2-201ENST00000606587 494 ntBASIC16.78■□□□□ 0.28
TNNI2P48788 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNNI2P48788 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNNI2P48788 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TNNI2P48788 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.78■□□□□ 0.28
TNNI2P48788 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TNNI2P48788 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNNI2P48788 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNNI2P48788 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNNI2P48788 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TNNI2P48788 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNNI2P48788 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC16.78■□□□□ 0.28
TNNI2P48788 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNNI2P48788 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNNI2P48788 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TNNI2P48788 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNNI2P48788 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TNNI2P48788 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNNI2P48788 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC16.77■□□□□ 0.28
TNNI2P48788 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TNNI2P48788 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.77■□□□□ 0.28
TNNI2P48788 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNNI2P48788 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNNI2P48788 AC139749.1-202ENST00000617529 3139 ntBASIC16.77■□□□□ 0.28
TNNI2P48788 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNNI2P48788 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNNI2P48788 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNNI2P48788 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNNI2P48788 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNNI2P48788 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.77■□□□□ 0.28
TNNI2P48788 SURF4-203ENST00000371991 715 ntTSL 3 BASIC16.77■□□□□ 0.28
TNNI2P48788 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TNNI2P48788 KRT18P62-201ENST00000446618 1287 ntBASIC16.77■□□□□ 0.28
TNNI2P48788 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNNI2P48788 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC16.77■□□□□ 0.28
TNNI2P48788 USB1-205ENST00000561743 1135 ntTSL 3 BASIC16.77■□□□□ 0.28
TNNI2P48788 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.77■□□□□ 0.28
TNNI2P48788 AC132825.4-202ENST00000578792 434 ntBASIC16.77■□□□□ 0.28
TNNI2P48788 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.77■□□□□ 0.28
TNNI2P48788 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC16.77■□□□□ 0.28
TNNI2P48788 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNNI2P48788 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.77■□□□□ 0.28
TNNI2P48788 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNNI2P48788 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNNI2P48788 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNNI2P48788 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.77■□□□□ 0.28
TNNI2P48788 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNNI2P48788 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.77■□□□□ 0.28
TNNI2P48788 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.77■□□□□ 0.27
TNNI2P48788 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNNI2P48788 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNNI2P48788 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms