Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.05□□□□□ -0.32
NR4A2P43354 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.05□□□□□ -0.32
NR4A2P43354 MIR4538-201ENST00000581377 78 ntBASIC13.05□□□□□ -0.32
NR4A2P43354 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.05□□□□□ -0.32
NR4A2P43354 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.05□□□□□ -0.32
NR4A2P43354 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.05□□□□□ -0.32
NR4A2P43354 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.05□□□□□ -0.32
NR4A2P43354 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NR4A2P43354 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC13.05□□□□□ -0.32
NR4A2P43354 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NR4A2P43354 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.05□□□□□ -0.32
NR4A2P43354 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC13.04□□□□□ -0.32
NR4A2P43354 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC13.04□□□□□ -0.32
NR4A2P43354 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NR4A2P43354 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NR4A2P43354 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.04□□□□□ -0.32
NR4A2P43354 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC13.04□□□□□ -0.32
NR4A2P43354 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NR4A2P43354 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13.04□□□□□ -0.32
NR4A2P43354 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.04□□□□□ -0.32
NR4A2P43354 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NR4A2P43354 MIR1908-201ENST00000410394 80 ntBASIC13.04□□□□□ -0.32
NR4A2P43354 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.04□□□□□ -0.32
NR4A2P43354 C2orf27AP3-201ENST00000434123 579 ntBASIC13.04□□□□□ -0.32
NR4A2P43354 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
NR4A2P43354 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.04□□□□□ -0.32
NR4A2P43354 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.04□□□□□ -0.32
NR4A2P43354 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.04□□□□□ -0.32
NR4A2P43354 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 AL354718.3-201ENST00000616414 581 ntBASIC13.04□□□□□ -0.32
NR4A2P43354 CR382287.1-201ENST00000623954 586 ntBASIC13.04□□□□□ -0.32
NR4A2P43354 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NR4A2P43354 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC13.04□□□□□ -0.32
NR4A2P43354 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 MSTO2P-201ENST00000314835 1709 ntBASIC13.04□□□□□ -0.32
NR4A2P43354 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.04□□□□□ -0.32
NR4A2P43354 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
NR4A2P43354 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
NR4A2P43354 DRD5P1-201ENST00000456605 1438 ntBASIC13.04□□□□□ -0.32
NR4A2P43354 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.04□□□□□ -0.32
NR4A2P43354 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
NR4A2P43354 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.04□□□□□ -0.32
NR4A2P43354 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A2P43354 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A2P43354 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A2P43354 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.03□□□□□ -0.32
NR4A2P43354 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.03□□□□□ -0.32
NR4A2P43354 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NR4A2P43354 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A2P43354 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A2P43354 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A2P43354 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A2P43354 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A2P43354 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.03□□□□□ -0.32
NR4A2P43354 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.03□□□□□ -0.32
NR4A2P43354 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.03□□□□□ -0.32
NR4A2P43354 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms