Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CCL4P13236 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CCL4P13236 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.27□□□□□ -0.28
CCL4P13236 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL4P13236 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CCL4P13236 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL4P13236 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL4P13236 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CCL4P13236 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CCL4P13236 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.27□□□□□ -0.28
CCL4P13236 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL4P13236 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CCL4P13236 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC13.27□□□□□ -0.29
CCL4P13236 AC073210.1-201ENST00000414799 232 ntBASIC13.27□□□□□ -0.29
CCL4P13236 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CCL4P13236 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 GALP-202ENST00000440823 889 ntTSL 5 BASIC13.27□□□□□ -0.29
CCL4P13236 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 VENTXP4-201ENST00000449029 958 ntBASIC13.27□□□□□ -0.29
CCL4P13236 AC026470.1-201ENST00000478038 846 ntBASIC13.27□□□□□ -0.29
CCL4P13236 PFN2-212ENST00000490975 858 ntTSL 4 BASIC13.27□□□□□ -0.29
CCL4P13236 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CCL4P13236 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC13.27□□□□□ -0.29
CCL4P13236 FAM86KP-201ENST00000509817 987 ntBASIC13.27□□□□□ -0.29
CCL4P13236 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC13.27□□□□□ -0.29
CCL4P13236 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC13.27□□□□□ -0.29
CCL4P13236 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC13.27□□□□□ -0.29
CCL4P13236 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC13.27□□□□□ -0.29
CCL4P13236 DLK1-205ENST00000556051 469 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL4P13236 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
CCL4P13236 AL160191.2-201ENST00000603975 601 ntBASIC13.27□□□□□ -0.29
CCL4P13236 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC13.27□□□□□ -0.29
CCL4P13236 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC13.27□□□□□ -0.29
CCL4P13236 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL4P13236 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL4P13236 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL4P13236 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CCL4P13236 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CCL4P13236 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL4P13236 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.27□□□□□ -0.29
CCL4P13236 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL4P13236 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL4P13236 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.26□□□□□ -0.29
CCL4P13236 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL4P13236 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL4P13236 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL4P13236 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CCL4P13236 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL4P13236 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL4P13236 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL4P13236 PKD1P5-201ENST00000532415 10291 ntBASIC13.26□□□□□ -0.29
CCL4P13236 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL4P13236 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL4P13236 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CCL4P13236 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL4P13236 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL4P13236 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL4P13236 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL4P13236 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CCL4P13236 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL4P13236 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC13.26□□□□□ -0.29
CCL4P13236 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL4P13236 TNRC18P2-201ENST00000417666 2714 ntBASIC13.26□□□□□ -0.29
CCL4P13236 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL4P13236 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC13.26□□□□□ -0.29
CCL4P13236 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC13.26□□□□□ -0.29
CCL4P13236 ASS1P2-201ENST00000439895 1223 ntBASIC13.26□□□□□ -0.29
CCL4P13236 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL4P13236 DDX39AP1-201ENST00000445147 1181 ntBASIC13.26□□□□□ -0.29
CCL4P13236 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC13.26□□□□□ -0.29
CCL4P13236 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CCL4P13236 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CCL4P13236 HNRNPA1P56-201ENST00000505767 954 ntBASIC13.26□□□□□ -0.29
CCL4P13236 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC13.26□□□□□ -0.29
CCL4P13236 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL4P13236 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC13.26□□□□□ -0.29
CCL4P13236 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms