Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AC005962.1-201ENST00000584100 773 ntBASIC14.3□□□□□ -0.12
APOA4P06727 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.3□□□□□ -0.12
APOA4P06727 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOA4P06727 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.3□□□□□ -0.12
APOA4P06727 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.3□□□□□ -0.12
APOA4P06727 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
APOA4P06727 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.3□□□□□ -0.12
APOA4P06727 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA4P06727 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA4P06727 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA4P06727 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.3□□□□□ -0.12
APOA4P06727 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
APOA4P06727 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.3□□□□□ -0.12
APOA4P06727 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA4P06727 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA4P06727 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA4P06727 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA4P06727 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.3□□□□□ -0.12
APOA4P06727 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC14.3□□□□□ -0.12
APOA4P06727 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
APOA4P06727 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA4P06727 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA4P06727 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA4P06727 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
APOA4P06727 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.29□□□□□ -0.12
APOA4P06727 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
APOA4P06727 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
APOA4P06727 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.29□□□□□ -0.12
APOA4P06727 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
APOA4P06727 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.29□□□□□ -0.12
APOA4P06727 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
APOA4P06727 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
APOA4P06727 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.29□□□□□ -0.12
APOA4P06727 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 POM121L10P-201ENST00000436994 1285 ntBASIC14.29□□□□□ -0.12
APOA4P06727 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.29□□□□□ -0.12
APOA4P06727 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.29□□□□□ -0.12
APOA4P06727 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.29□□□□□ -0.12
APOA4P06727 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.29□□□□□ -0.12
APOA4P06727 FAM8A2P-201ENST00000528813 1142 ntBASIC14.29□□□□□ -0.12
APOA4P06727 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.29□□□□□ -0.12
APOA4P06727 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.29□□□□□ -0.12
APOA4P06727 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 AC005730.2-201ENST00000564549 1184 ntBASIC14.29□□□□□ -0.12
APOA4P06727 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.29□□□□□ -0.12
APOA4P06727 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 AC091271.1-201ENST00000611877 1162 ntBASIC14.29□□□□□ -0.12
APOA4P06727 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
APOA4P06727 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.29□□□□□ -0.12
APOA4P06727 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
APOA4P06727 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
APOA4P06727 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.29□□□□□ -0.12
APOA4P06727 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.29□□□□□ -0.12
APOA4P06727 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.29□□□□□ -0.12
APOA4P06727 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
APOA4P06727 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOA4P06727 AL122018.1-201ENST00000446607 2310 ntBASIC14.29□□□□□ -0.12
APOA4P06727 AC027612.1-201ENST00000445234 2395 ntBASIC14.29□□□□□ -0.12
APOA4P06727 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
APOA4P06727 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 AC114271.1-201ENST00000612689 2813 ntBASIC14.28□□□□□ -0.12
APOA4P06727 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
APOA4P06727 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.28□□□□□ -0.12
APOA4P06727 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
APOA4P06727 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.28□□□□□ -0.12
APOA4P06727 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.28□□□□□ -0.12
APOA4P06727 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
APOA4P06727 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA4P06727 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms