Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.48□□□□□ -0.25
MT-ND1P03886 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.48□□□□□ -0.25
MT-ND1P03886 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 AC022400.8-201ENST00000623453 3599 ntBASIC13.47□□□□□ -0.25
MT-ND1P03886 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.47□□□□□ -0.25
MT-ND1P03886 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.47□□□□□ -0.25
MT-ND1P03886 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
MT-ND1P03886 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
MT-ND1P03886 AL359845.1-201ENST00000458202 1648 ntBASIC13.47□□□□□ -0.25
MT-ND1P03886 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.47□□□□□ -0.25
MT-ND1P03886 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
MT-ND1P03886 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.47□□□□□ -0.25
MT-ND1P03886 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.47□□□□□ -0.25
MT-ND1P03886 POM121L8P-201ENST00000417732 1281 ntBASIC13.47□□□□□ -0.25
MT-ND1P03886 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.47□□□□□ -0.25
MT-ND1P03886 ARSEP1-201ENST00000420443 635 ntBASIC13.47□□□□□ -0.25
MT-ND1P03886 AC136604.1-202ENST00000425471 771 ntBASIC13.47□□□□□ -0.25
MT-ND1P03886 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.47□□□□□ -0.25
MT-ND1P03886 AC245100.3-201ENST00000441281 285 ntBASIC13.47□□□□□ -0.25
MT-ND1P03886 POM121L9P-203ENST00000441984 1285 ntBASIC13.47□□□□□ -0.25
MT-ND1P03886 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.47□□□□□ -0.25
MT-ND1P03886 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.47□□□□□ -0.25
MT-ND1P03886 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.47□□□□□ -0.25
MT-ND1P03886 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.47□□□□□ -0.25
MT-ND1P03886 MESTP3-201ENST00000503460 968 ntBASIC13.47□□□□□ -0.25
MT-ND1P03886 WASH4P-201ENST00000564273 1246 ntBASIC13.47□□□□□ -0.25
MT-ND1P03886 AC138466.3-201ENST00000619983 221 ntBASIC13.47□□□□□ -0.25
MT-ND1P03886 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.47□□□□□ -0.25
MT-ND1P03886 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 AC115284.2-201ENST00000624646 2054 ntBASIC13.47□□□□□ -0.25
MT-ND1P03886 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.47□□□□□ -0.25
MT-ND1P03886 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
MT-ND1P03886 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
MT-ND1P03886 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
MT-ND1P03886 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.47□□□□□ -0.25
MT-ND1P03886 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC13.47□□□□□ -0.25
MT-ND1P03886 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.47□□□□□ -0.25
MT-ND1P03886 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
MT-ND1P03886 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MT-ND1P03886 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
MT-ND1P03886 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
MT-ND1P03886 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.46□□□□□ -0.25
MT-ND1P03886 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.46□□□□□ -0.25
MT-ND1P03886 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MT-ND1P03886 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
MT-ND1P03886 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.46□□□□□ -0.25
MT-ND1P03886 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
MT-ND1P03886 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.46□□□□□ -0.25
MT-ND1P03886 AC009474.1-201ENST00000455096 1565 ntBASIC13.46□□□□□ -0.25
MT-ND1P03886 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MT-ND1P03886 AC027369.3-201ENST00000530465 3707 ntBASIC13.46□□□□□ -0.25
MT-ND1P03886 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MT-ND1P03886 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
MT-ND1P03886 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MT-ND1P03886 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MT-ND1P03886 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MT-ND1P03886 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MT-ND1P03886 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
MT-ND1P03886 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.46□□□□□ -0.25
MT-ND1P03886 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MT-ND1P03886 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.46□□□□□ -0.25
MT-ND1P03886 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MT-ND1P03886 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MT-ND1P03886 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
MT-ND1P03886 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
MT-ND1P03886 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
MT-ND1P03886 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.46□□□□□ -0.25
MT-ND1P03886 BAATP1-201ENST00000412284 1225 ntBASIC13.46□□□□□ -0.25
MT-ND1P03886 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.46□□□□□ -0.25
MT-ND1P03886 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.46□□□□□ -0.25
MT-ND1P03886 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.46□□□□□ -0.25
MT-ND1P03886 AC012441.1-201ENST00000446669 685 ntBASIC13.46□□□□□ -0.25
MT-ND1P03886 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MT-ND1P03886 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
MT-ND1P03886 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms