Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD4P01730 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD4P01730 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD4P01730 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD4P01730 AC015802.1-201ENST00000588104 1449 ntBASIC15.58■□□□□ 0.08
CD4P01730 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD4P01730 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CD4P01730 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC15.58■□□□□ 0.08
CD4P01730 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD4P01730 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD4P01730 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD4P01730 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC15.58■□□□□ 0.08
CD4P01730 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.58■□□□□ 0.08
CD4P01730 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD4P01730 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD4P01730 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.58■□□□□ 0.08
CD4P01730 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD4P01730 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC15.57■□□□□ 0.08
CD4P01730 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.57■□□□□ 0.08
CD4P01730 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD4P01730 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD4P01730 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
CD4P01730 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
CD4P01730 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD4P01730 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CD4P01730 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD4P01730 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD4P01730 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD4P01730 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD4P01730 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC15.57■□□□□ 0.08
CD4P01730 HNRNPA1P58-201ENST00000403629 610 ntBASIC15.57■□□□□ 0.08
CD4P01730 AL929302.1-201ENST00000426556 871 ntBASIC15.57■□□□□ 0.08
CD4P01730 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC15.57■□□□□ 0.08
CD4P01730 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC15.57■□□□□ 0.08
CD4P01730 ASS1P2-201ENST00000439895 1223 ntBASIC15.57■□□□□ 0.08
CD4P01730 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD4P01730 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC15.57■□□□□ 0.08
CD4P01730 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CD4P01730 SLC25A15P3-201ENST00000505530 290 ntBASIC15.57■□□□□ 0.08
CD4P01730 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD4P01730 RN7SKP155-201ENST00000516031 288 ntBASIC15.57■□□□□ 0.08
CD4P01730 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.57■□□□□ 0.08
CD4P01730 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC15.57■□□□□ 0.08
CD4P01730 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CD4P01730 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD4P01730 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD4P01730 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.57■□□□□ 0.08
CD4P01730 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD4P01730 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD4P01730 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.57■□□□□ 0.08
CD4P01730 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.57■□□□□ 0.08
CD4P01730 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD4P01730 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD4P01730 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CD4P01730 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.57■□□□□ 0.08
CD4P01730 RN7SL832P-201ENST00000607781 1756 ntBASIC15.57■□□□□ 0.08
CD4P01730 AC090505.1-201ENST00000430515 1834 ntBASIC15.57■□□□□ 0.08
CD4P01730 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
CD4P01730 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD4P01730 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CD4P01730 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD4P01730 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CD4P01730 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CD4P01730 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD4P01730 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD4P01730 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD4P01730 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD4P01730 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.56■□□□□ 0.08
CD4P01730 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD4P01730 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD4P01730 KRT18P62-201ENST00000446618 1287 ntBASIC15.56■□□□□ 0.08
CD4P01730 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.56■□□□□ 0.08
CD4P01730 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD4P01730 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC15.56■□□□□ 0.08
CD4P01730 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CD4P01730 BATF-202ENST00000555504 361 ntTSL 2 BASIC15.56■□□□□ 0.08
CD4P01730 MIR5001-201ENST00000580185 100 ntBASIC15.56■□□□□ 0.08
CD4P01730 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CD4P01730 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD4P01730 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CD4P01730 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC15.56■□□□□ 0.08
CD4P01730 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD4P01730 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.56■□□□□ 0.08
CD4P01730 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC15.56■□□□□ 0.08
CD4P01730 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC15.56■□□□□ 0.08
CD4P01730 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CD4P01730 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD4P01730 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD4P01730 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC15.56■□□□□ 0.08
CD4P01730 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD4P01730 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD4P01730 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD4P01730 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.56■□□□□ 0.08
CD4P01730 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD4P01730 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.56■□□□□ 0.08
CD4P01730 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD4P01730 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CD4P01730 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD4P01730 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD4P01730 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms