Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.04□□□□□ -0.16
PDGFBP01127 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDGFBP01127 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PDGFBP01127 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDGFBP01127 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDGFBP01127 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.04□□□□□ -0.16
PDGFBP01127 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.04□□□□□ -0.16
PDGFBP01127 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDGFBP01127 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDGFBP01127 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
PDGFBP01127 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
PDGFBP01127 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDGFBP01127 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
PDGFBP01127 CFL1P6-201ENST00000400899 494 ntBASIC14.04□□□□□ -0.16
PDGFBP01127 MPV17-209ENST00000405983 859 ntTSL 5 BASIC14.04□□□□□ -0.16
PDGFBP01127 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC14.04□□□□□ -0.16
PDGFBP01127 CRIP1P2-201ENST00000425396 228 ntBASIC14.04□□□□□ -0.16
PDGFBP01127 AC010086.2-201ENST00000428616 226 ntBASIC14.04□□□□□ -0.16
PDGFBP01127 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC14.04□□□□□ -0.16
PDGFBP01127 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC14.04□□□□□ -0.16
PDGFBP01127 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC14.04□□□□□ -0.16
PDGFBP01127 RNA5SP420-201ENST00000516997 137 ntBASIC14.04□□□□□ -0.16
PDGFBP01127 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC14.04□□□□□ -0.16
PDGFBP01127 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PDGFBP01127 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC14.04□□□□□ -0.16
PDGFBP01127 AL512310.5-201ENST00000551999 515 ntBASIC14.04□□□□□ -0.16
PDGFBP01127 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC14.04□□□□□ -0.16
PDGFBP01127 PCTP-206ENST00000573500 919 ntTSL 3 BASIC14.04□□□□□ -0.16
PDGFBP01127 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC14.04□□□□□ -0.16
PDGFBP01127 CCND3P2-201ENST00000579393 537 ntBASIC14.04□□□□□ -0.16
PDGFBP01127 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC14.04□□□□□ -0.16
PDGFBP01127 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC14.04□□□□□ -0.16
PDGFBP01127 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC14.04□□□□□ -0.16
PDGFBP01127 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDGFBP01127 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PDGFBP01127 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDGFBP01127 AC008741.2-201ENST00000612792 3115 ntBASIC14.04□□□□□ -0.16
PDGFBP01127 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDGFBP01127 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDGFBP01127 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDGFBP01127 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDGFBP01127 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC14.04□□□□□ -0.16
PDGFBP01127 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDGFBP01127 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDGFBP01127 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
PDGFBP01127 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDGFBP01127 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDGFBP01127 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDGFBP01127 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDGFBP01127 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDGFBP01127 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDGFBP01127 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.03□□□□□ -0.16
PDGFBP01127 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.03□□□□□ -0.16
PDGFBP01127 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDGFBP01127 DOC2GP-204ENST00000639052 2548 ntBASIC14.03□□□□□ -0.16
PDGFBP01127 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.03□□□□□ -0.16
PDGFBP01127 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDGFBP01127 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDGFBP01127 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDGFBP01127 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDGFBP01127 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDGFBP01127 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDGFBP01127 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PDGFBP01127 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
PDGFBP01127 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC14.03□□□□□ -0.16
PDGFBP01127 AC092865.2-201ENST00000439409 971 ntBASIC14.03□□□□□ -0.16
PDGFBP01127 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
PDGFBP01127 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC14.03□□□□□ -0.16
PDGFBP01127 AC104212.2-201ENST00000478813 628 ntBASIC14.03□□□□□ -0.16
PDGFBP01127 RNF7-205ENST00000480908 782 ntTSL 4 BASIC14.03□□□□□ -0.16
PDGFBP01127 CD44-224ENST00000526669 870 ntTSL 5 BASIC14.03□□□□□ -0.16
PDGFBP01127 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC14.03□□□□□ -0.16
PDGFBP01127 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDGFBP01127 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC14.03□□□□□ -0.16
PDGFBP01127 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
PDGFBP01127 AC148476.1-201ENST00000622182 705 ntBASIC14.03□□□□□ -0.16
PDGFBP01127 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
PDGFBP01127 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDGFBP01127 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC14.03□□□□□ -0.16
PDGFBP01127 KRT8P38-201ENST00000441370 1430 ntBASIC14.03□□□□□ -0.16
PDGFBP01127 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDGFBP01127 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDGFBP01127 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDGFBP01127 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PDGFBP01127 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDGFBP01127 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDGFBP01127 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.03□□□□□ -0.16
PDGFBP01127 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
PDGFBP01127 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PDGFBP01127 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDGFBP01127 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDGFBP01127 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.03□□□□□ -0.16
PDGFBP01127 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.03□□□□□ -0.16
PDGFBP01127 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.03□□□□□ -0.16
PDGFBP01127 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.03□□□□□ -0.16
PDGFBP01127 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
PDGFBP01127 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDGFBP01127 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.02□□□□□ -0.16
PDGFBP01127 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.16
PDGFBP01127 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 274.4 ms