Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
KDELR3O43731 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDELR3O43731 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.34□□□□□ -0.11
KDELR3O43731 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KDELR3O43731 AC098934.1-203ENST00000442868 1262 ntBASIC14.34□□□□□ -0.11
KDELR3O43731 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.34□□□□□ -0.11
KDELR3O43731 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.34□□□□□ -0.11
KDELR3O43731 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.34□□□□□ -0.11
KDELR3O43731 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.34□□□□□ -0.11
KDELR3O43731 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KDELR3O43731 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KDELR3O43731 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KDELR3O43731 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KDELR3O43731 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
KDELR3O43731 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.34□□□□□ -0.11
KDELR3O43731 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.34□□□□□ -0.11
KDELR3O43731 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.34□□□□□ -0.11
KDELR3O43731 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.34□□□□□ -0.11
KDELR3O43731 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.34□□□□□ -0.11
KDELR3O43731 MIR4522-201ENST00000584932 87 ntBASIC14.34□□□□□ -0.11
KDELR3O43731 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KDELR3O43731 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
KDELR3O43731 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDELR3O43731 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDELR3O43731 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
KDELR3O43731 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KDELR3O43731 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDELR3O43731 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.34□□□□□ -0.11
KDELR3O43731 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
KDELR3O43731 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDELR3O43731 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.34□□□□□ -0.11
KDELR3O43731 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDELR3O43731 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDELR3O43731 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDELR3O43731 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDELR3O43731 AC008620.2-201ENST00000510294 1569 ntBASIC14.34□□□□□ -0.11
KDELR3O43731 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDELR3O43731 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDELR3O43731 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.34□□□□□ -0.11
KDELR3O43731 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDELR3O43731 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.33□□□□□ -0.11
KDELR3O43731 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
KDELR3O43731 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
KDELR3O43731 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.33□□□□□ -0.11
KDELR3O43731 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
KDELR3O43731 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
KDELR3O43731 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.33□□□□□ -0.12
KDELR3O43731 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
KDELR3O43731 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.33□□□□□ -0.12
KDELR3O43731 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KDELR3O43731 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.33□□□□□ -0.12
KDELR3O43731 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KDELR3O43731 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
KDELR3O43731 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KDELR3O43731 AC006372.4-201ENST00000624122 1543 ntBASIC14.33□□□□□ -0.12
KDELR3O43731 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.33□□□□□ -0.12
KDELR3O43731 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.33□□□□□ -0.12
KDELR3O43731 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KDELR3O43731 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.33□□□□□ -0.12
KDELR3O43731 AC026316.1-201ENST00000398900 414 ntBASIC14.33□□□□□ -0.12
KDELR3O43731 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.33□□□□□ -0.12
KDELR3O43731 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.33□□□□□ -0.12
KDELR3O43731 RN7SL788P-201ENST00000460504 316 ntBASIC14.33□□□□□ -0.12
KDELR3O43731 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.33□□□□□ -0.12
KDELR3O43731 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.33□□□□□ -0.12
KDELR3O43731 AC095040.1-201ENST00000513286 675 ntBASIC14.33□□□□□ -0.12
KDELR3O43731 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
KDELR3O43731 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.33□□□□□ -0.12
KDELR3O43731 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.33□□□□□ -0.12
KDELR3O43731 AC145285.5-201ENST00000562217 361 ntBASIC14.33□□□□□ -0.12
KDELR3O43731 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
KDELR3O43731 SIGLEC22P-201ENST00000599104 714 ntBASIC14.33□□□□□ -0.12
KDELR3O43731 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.33□□□□□ -0.12
KDELR3O43731 AC103691.2-201ENST00000618824 433 ntBASIC14.33□□□□□ -0.12
KDELR3O43731 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.33□□□□□ -0.12
KDELR3O43731 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
KDELR3O43731 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
KDELR3O43731 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
KDELR3O43731 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.33□□□□□ -0.12
KDELR3O43731 TBC1D27-202ENST00000424239 1573 ntBASIC14.33□□□□□ -0.12
KDELR3O43731 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.33□□□□□ -0.12
KDELR3O43731 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
KDELR3O43731 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.33□□□□□ -0.12
KDELR3O43731 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KDELR3O43731 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.33□□□□□ -0.12
KDELR3O43731 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
KDELR3O43731 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
KDELR3O43731 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
KDELR3O43731 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KDELR3O43731 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KDELR3O43731 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
KDELR3O43731 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.33□□□□□ -0.12
KDELR3O43731 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDELR3O43731 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDELR3O43731 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDELR3O43731 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KDELR3O43731 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDELR3O43731 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
KDELR3O43731 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDELR3O43731 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms